Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1872
         (708 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80561-1|AAB21409.1|  601|Drosophila melanogaster pdm-1 protein.       30   3.5  
M81957-1|AAA28829.1|  601|Drosophila melanogaster POU domain pro...    30   3.5  
M65015-1|AAA28480.1|  601|Drosophila melanogaster dPOU-19 protein.     30   3.5  
AY118387-1|AAM48416.1|  601|Drosophila melanogaster RE34782p pro...    30   3.5  
AE014134-2223|AAF53205.2|  601|Drosophila melanogaster CG6246-PA...    30   3.5  

>S80561-1|AAB21409.1|  601|Drosophila melanogaster pdm-1 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 388 HHINHYNDAMYATTYNLIDANNGVIQLFGRNFIKCQNSIYGSHSRNVSQLINFLKGSTEL 567
           HH+NH N   Y    +  DAN G + L         NS + + S +     N +K +T  
Sbjct: 110 HHLNHLNHHQYKQEEDYDDANGGALNL------TSDNSRHSTQSPS-----NSVKSATAS 158

Query: 568 PSPII 582
           P P+I
Sbjct: 159 PVPVI 163


>M81957-1|AAA28829.1|  601|Drosophila melanogaster POU domain
           protein protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 388 HHINHYNDAMYATTYNLIDANNGVIQLFGRNFIKCQNSIYGSHSRNVSQLINFLKGSTEL 567
           HH+NH N   Y    +  DAN G + L         NS + + S +     N +K +T  
Sbjct: 110 HHLNHLNHHQYKQEEDYDDANGGALNL------TSDNSRHSTQSPS-----NSVKSATAS 158

Query: 568 PSPII 582
           P P+I
Sbjct: 159 PVPVI 163


>M65015-1|AAA28480.1|  601|Drosophila melanogaster dPOU-19 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 388 HHINHYNDAMYATTYNLIDANNGVIQLFGRNFIKCQNSIYGSHSRNVSQLINFLKGSTEL 567
           HH+NH N   Y    +  DAN G + L         NS + + S +     N +K +T  
Sbjct: 110 HHLNHLNHHQYKQEEDYDDANGGALNL------TSDNSRHSTQSPS-----NSVKSATAS 158

Query: 568 PSPII 582
           P P+I
Sbjct: 159 PVPVI 163


>AY118387-1|AAM48416.1|  601|Drosophila melanogaster RE34782p
           protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 388 HHINHYNDAMYATTYNLIDANNGVIQLFGRNFIKCQNSIYGSHSRNVSQLINFLKGSTEL 567
           HH+NH N   Y    +  DAN G + L         NS + + S +     N +K +T  
Sbjct: 110 HHLNHLNHHQYKQEEDYDDANGGALNL------TSDNSRHSTQSPS-----NSVKSATAS 158

Query: 568 PSPII 582
           P P+I
Sbjct: 159 PVPVI 163


>AE014134-2223|AAF53205.2|  601|Drosophila melanogaster CG6246-PA
           protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 388 HHINHYNDAMYATTYNLIDANNGVIQLFGRNFIKCQNSIYGSHSRNVSQLINFLKGSTEL 567
           HH+NH N   Y    +  DAN G + L         NS + + S +     N +K +T  
Sbjct: 110 HHLNHLNHHQYKQEEDYDDANGGALNL------TSDNSRHSTQSPS-----NSVKSATAS 158

Query: 568 PSPII 582
           P P+I
Sbjct: 159 PVPVI 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,201,138
Number of Sequences: 53049
Number of extensions: 571897
Number of successful extensions: 1041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)