Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1870
         (616 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4DEV9 Cluster: Putative uncharacterized protein; n=2; ...    38   0.25 
UniRef50_Q5DCC8 Cluster: SJCHGC09330 protein; n=1; Schistosoma j...    32   9.4  
UniRef50_Q2HBV0 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_Q4DEV9 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1087

 Score = 37.5 bits (83), Expect = 0.25
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +2

Query: 41  ISCICACALLVHEFMSSLSSCIGEAEW--DQKEKGQEN--RKASSAVRSFVQKAS 193
           +SC C+C +  H    +   C G   W  +++EKG++    K S A RSF  K+S
Sbjct: 98  VSCCCSCCIGYHHLFHARHGCSGSVCWRVEEREKGEKGDPLKESCARRSFSPKSS 152


>UniRef50_Q5DCC8 Cluster: SJCHGC09330 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09330 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 448

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -3

Query: 233 CVL*YNYMTDFLRH*LFERSSLRQTRPFCSLVPSLFDPTPPRQCMSLNY-S*IHAQATRM 57
           C L + Y  D   H     S+   T+P     P+   P+ P+  +SL+Y S + A A R+
Sbjct: 219 CRLDFIYKRDLKWHEYLHHSAHPLTKPIDENSPTDLSPSLPKNQLSLSYSSQLFAHAPRV 278

Query: 56  RIYMKLCSKHV 24
            +    C +HV
Sbjct: 279 TLKCLECGEHV 289


>UniRef50_Q2HBV0 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 711

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 143 LVPSLFDPTPPRQCMSLNYS*IHAQATRMRIYMKLCS 33
           L P   DP+PP +C    YS +H+    + +YM  C+
Sbjct: 529 LAPEFQDPSPPMRCAGPEYSWVHSTGP-LLVYMAACN 564


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,199,323
Number of Sequences: 1657284
Number of extensions: 10987460
Number of successful extensions: 23163
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23158
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)