Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1870
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0339 - 7623897-7625837                                           31   0.73 
06_03_0568 + 22351552-22351679,22352176-22352227,22353044-223531...    30   1.7  
09_04_0646 - 19194261-19195730                                         29   2.9  
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766     28   5.1  
09_02_0546 - 10454404-10455687                                         28   5.1  
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980...    28   5.1  
11_06_0697 + 26371193-26371397,26371562-26374254                       28   6.8  

>03_02_0339 - 7623897-7625837
          Length = 646

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 507 HSRPGVGWTASINRNAKSLYSFVLRIKCKIH 415
           HSR  V WT S N N  SL+S VL     +H
Sbjct: 293 HSRYYVAWTGSRNMNMTSLHSVVLAKTLSVH 323


>06_03_0568 +
           22351552-22351679,22352176-22352227,22353044-22353117,
           22353233-22353322,22353833-22353976,22354885-22354973,
           22355539-22355612,22357233-22357317,22357677-22357952,
           22358392-22358420
          Length = 346

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -1

Query: 547 WPRRWHMKQPP-PNTLASRRG--LDGVYQPQCKISLFICFTNKV*NPFINMMK 398
           WPRRW  K+PP  ++ A RR   L   +Q    I   +  T+   N    +MK
Sbjct: 254 WPRRWQAKEPPLGSSSAHRRSLPLPSPHQQHISIPFSVLLTSHRNNSLEPIMK 306


>09_04_0646 - 19194261-19195730
          Length = 489

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 346 IFMFTEHTPHLLVESFTISS 405
           +F+FT H P LL  SFT+SS
Sbjct: 44  VFLFTFHYPSLLSRSFTLSS 63


>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
          Length = 943

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 83  MSSLSSCIGEAEWDQKEKGQENRKASSAVRSFVQKASVLKNLSCSYITIHRENIES 250
           +  LSS + EA   +K  G+ +    +A+RS  ++ ++ + + CS +   R+++ S
Sbjct: 754 IDELSSLVAEASTARKLAGEYSANGVAAIRSPEKQHNMFRKMICSPMDNVRDDVNS 809


>09_02_0546 - 10454404-10455687
          Length = 427

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 480 PSSPRRDASVLGGGCFMCQRRGHYSR 557
           P    ++AS++   CFMC  +GHY+R
Sbjct: 91  PHVDPKEASII---CFMCDEQGHYAR 113


>05_03_0201 -
           9762563-9762843,9763037-9763919,9763988-9764036,
           9806710-9807680
          Length = 727

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 480 PSSPRRDASVLGGGCFMCQRRGHYSR 557
           P    ++AS++   CFMC  +GHY+R
Sbjct: 91  PHVGSKEASII---CFMCDEQGHYAR 113


>11_06_0697 + 26371193-26371397,26371562-26374254
          Length = 965

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 122 DQKEKGQENRKASSAVRSFVQKASVLKNLSCSYITIHRENIES 250
           D+K KG  N+KA   V     KAS+L+ L    + +H +  ES
Sbjct: 168 DRKIKGSFNKKAWVCVSKVYSKASLLREL-LRIMEVHHDQDES 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,219,509
Number of Sequences: 37544
Number of extensions: 302736
Number of successful extensions: 743
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)