Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1870
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003270-1|AAO25027.1|  926|Drosophila melanogaster LD20211p pro...    29   6.6  
AY069361-1|AAL39506.1|  513|Drosophila melanogaster LD06532p pro...    29   6.6  
AE014296-66|AAF47366.1|  926|Drosophila melanogaster CG7008-PA p...    29   6.6  

>BT003270-1|AAO25027.1|  926|Drosophila melanogaster LD20211p
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 170 RSFVQKASVLKNLSCS--YITIHRENIESKYC 259
           R F++K  + K + C+  YI+  REN   KYC
Sbjct: 418 REFLRKKLINKKVQCNLDYISPPRENFPEKYC 449


>AY069361-1|AAL39506.1|  513|Drosophila melanogaster LD06532p
           protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 170 RSFVQKASVLKNLSCS--YITIHRENIESKYC 259
           R F++K  + K + C+  YI+  REN   KYC
Sbjct: 5   REFLRKKLINKKVQCNLDYISPPRENFPEKYC 36


>AE014296-66|AAF47366.1|  926|Drosophila melanogaster CG7008-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 170 RSFVQKASVLKNLSCS--YITIHRENIESKYC 259
           R F++K  + K + C+  YI+  REN   KYC
Sbjct: 418 REFLRKKLINKKVQCNLDYISPPRENFPEKYC 449


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,956,485
Number of Sequences: 53049
Number of extensions: 524862
Number of successful extensions: 911
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)