Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1868
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 7   PRSTPDKR 30
           PRSTPDKR
Sbjct: 841 PRSTPDKR 848


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 251 VEQSSVPPYPGPTSCLRYTVFRLTIPRHSFMNGTST*IYL 132
           V++ S+PP        R   F L IP+H  + G    I+L
Sbjct: 60  VKKISIPPLGEILELERDANFSLFIPKHRRIAGRLIDIFL 99


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 274 YSLRGRSTSNKAASRPTRDPLPASVTPF 191
           Y L  ++  +   +RP   P PA   P+
Sbjct: 147 YQLDSKTAGSMGLTRPPMYPFPAGQYPY 174


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 274 YSLRGRSTSNKAASRPTRDPLPASVTPF 191
           Y L  ++  +   +RP   P PA   P+
Sbjct: 39  YQLDSKTAGSMGLTRPPMYPFPAGQYPY 66


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 514 YFNIFFILRIFKF*VNRK 461
           Y NIFFI   + F  N+K
Sbjct: 21  YLNIFFITPWYDFPTNQK 38


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 242 SSVPPYPGPTSCLRYT 195
           SS+PPYP  T     T
Sbjct: 483 SSLPPYPNRTQITEVT 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,465
Number of Sequences: 336
Number of extensions: 3173
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)