Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1865
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014111-1|AAH14111.1| 794|Homo sapiens ecotropic viral integra... 115 2e-25
AL354890-2|CAI21914.1| 810|Homo sapiens ecotropic viral integra... 113 5e-25
AL133332-1|CAC19437.2| 810|Homo sapiens ecotropic viral integra... 113 5e-25
AF042345-1|AAC16041.1| 607|Homo sapiens truncated EVI5 protein. 109 1e-23
AF008915-1|AAC16031.1| 810|Homo sapiens EVI-5 homolog protein. 109 1e-23
Z99127-7|CAI18937.1| 815|Homo sapiens RAB GTPase activating pro... 54 7e-07
AY364260-1|AAQ76819.1| 468|Homo sapiens HHL protein. 54 7e-07
AL591108-1|CAH70225.1| 815|Homo sapiens RAB GTPase activating p... 54 7e-07
AL161671-6|CAI16281.1| 815|Homo sapiens RAB GTPase activating p... 54 7e-07
AL136377-4|CAI22935.1| 815|Homo sapiens RAB GTPase activating p... 54 7e-07
AL031286-3|CAI22382.1| 815|Homo sapiens RAB GTPase activating p... 54 7e-07
AL022400-4|CAI22878.1| 815|Homo sapiens RAB GTPase activating p... 54 7e-07
AL022171-4|CAI20384.1| 815|Homo sapiens RAB GTPase activating p... 54 7e-07
AK095838-1|BAC04635.1| 815|Homo sapiens protein ( Homo sapiens ... 54 7e-07
BC054492-1|AAH54492.1| 997|Homo sapiens RABGAP1 protein protein. 53 1e-06
AL365338-3|CAH70298.1| 997|Homo sapiens RAB GTPase activating p... 53 1e-06
AJ011679-1|CAB40267.2| 997|Homo sapiens Rab6 GTPase activating ... 53 1e-06
AK131449-1|BAD18594.1| 599|Homo sapiens d) (GAPCENA). protein. 52 2e-06
BC041888-1|AAH41888.1| 605|Homo sapiens RABGAP1L protein protein. 44 4e-04
AL157958-1|CAB76100.1| 582|Homo sapiens hypothetical protein pr... 44 4e-04
AL031286-2|CAI22381.1| 605|Homo sapiens RAB GTPase activating p... 44 4e-04
AL031286-1|CAI22380.1| 582|Homo sapiens RAB GTPase activating p... 44 4e-04
AL022400-3|CAI22877.1| 605|Homo sapiens RAB GTPase activating p... 44 4e-04
AL022400-2|CAI22876.1| 582|Homo sapiens RAB GTPase activating p... 44 4e-04
AL022400-1|CAI22875.1| 252|Homo sapiens RAB GTPase activating p... 44 4e-04
AL022171-3|CAI20383.1| 605|Homo sapiens RAB GTPase activating p... 44 4e-04
AL022171-2|CAI20382.1| 582|Homo sapiens RAB GTPase activating p... 44 4e-04
AL022171-1|CAI20381.1| 252|Homo sapiens RAB GTPase activating p... 44 4e-04
AL021069-2|CAI23486.1| 605|Homo sapiens RAB GTPase activating p... 44 4e-04
AL021069-1|CAI23485.1| 252|Homo sapiens RAB GTPase activating p... 44 4e-04
D13644-1|BAA02807.2| 838|Homo sapiens KIAA0019 protein protein. 40 0.013
BC042943-1|AAH42943.1| 828|Homo sapiens USP6 N-terminal like pr... 40 0.013
AL590416-1|CAI16966.1| 828|Homo sapiens USP6 N-terminal like pr... 40 0.013
AL512631-1|CAH70484.1| 828|Homo sapiens USP6 N-terminal like pr... 40 0.013
BC041167-1|AAH41167.1| 678|Homo sapiens TBC1 domain family, mem... 38 0.030
AL833868-1|CAD38726.1| 381|Homo sapiens hypothetical protein pr... 38 0.030
AB037743-1|BAA92560.1| 702|Homo sapiens KIAA1322 protein protein. 38 0.030
BC126979-1|AAI26980.1| 432|Homo sapiens TBC1D1 protein protein. 38 0.052
BC053648-1|AAH53648.1| 891|Homo sapiens TBC1D1 protein protein. 38 0.052
BC050321-1|AAH50321.3| 1168|Homo sapiens TBC1 (tre-2/USP6, BUB2,... 38 0.052
BC014529-1|AAH14529.1| 900|Homo sapiens TBC1D1 protein protein. 38 0.052
AK027355-1|BAB55057.1| 674|Homo sapiens protein ( Homo sapiens ... 38 0.052
AB029031-1|BAA83060.1| 763|Homo sapiens KIAA1108 protein protein. 38 0.052
BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein. 36 0.12
AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, mem... 36 0.12
AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, mem... 36 0.12
AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein. 36 0.12
BC062999-1|AAH62999.1| 446|Homo sapiens TBC1 domain family, mem... 36 0.16
BC036873-1|AAH36873.3| 446|Homo sapiens TBC1 domain family, mem... 36 0.16
CT841514-1|CAJ86444.1| 508|Homo sapiens dJ130H16.2 protein. 36 0.21
BC150214-1|AAI50215.1| 508|Homo sapiens TBC1 domain family, mem... 36 0.21
BC150187-1|AAI50188.1| 508|Homo sapiens TBC1 domain family, mem... 36 0.21
BC142940-1|AAI42941.1| 508|Homo sapiens TBC1 domain family, mem... 36 0.21
AK074656-1|BAC11117.1| 508|Homo sapiens protein ( Homo sapiens ... 36 0.21
AF331038-1|AAK35048.1| 508|Homo sapiens EPI64 protein. 36 0.21
AC004997-3|AAC23434.1| 438|Homo sapiens WUGSC:H_DJ130H16.2 prot... 36 0.21
AL355341-2|CAH70583.2| 775|Homo sapiens TBC1 domain family, mem... 35 0.36
AL138759-3|CAH70223.2| 775|Homo sapiens TBC1 domain family, mem... 35 0.36
AB011180-1|BAA25534.1| 775|Homo sapiens KIAA0608 protein protein. 35 0.36
BC098419-1|AAH98419.1| 668|Homo sapiens TBC1D10B protein protein. 34 0.64
BC093816-1|AAH93816.1| 533|Homo sapiens TBC1 domain family, mem... 34 0.64
BC093814-1|AAH93814.1| 533|Homo sapiens TBC1 domain family, mem... 34 0.64
BC072453-1|AAH72453.2| 533|Homo sapiens TBC1 domain family, mem... 34 0.64
BC063112-1|AAH63112.1| 622|Homo sapiens TBC1D10B protein protein. 34 0.64
AK023192-1|BAB14454.1| 533|Homo sapiens protein ( Homo sapiens ... 34 0.64
CR456441-1|CAG30327.1| 749|Homo sapiens dJ1042K10.2 protein. 33 1.5
BC008078-1|AAH08078.1| 749|Homo sapiens RUN and TBC1 domain con... 33 1.5
AY308849-1|AAQ81879.1| 749|Homo sapiens merlin binding protein ... 33 1.5
AL022238-3|CAA18266.1| 777|Homo sapiens protein ( Human DNA seq... 33 1.5
AK131086-1|BAC85136.1| 217|Homo sapiens FLJ00288 protein protein. 33 1.5
AK000006-1|BAA92231.1| 401|Homo sapiens FLJ00006 protein protein. 33 1.5
AB275763-1|BAF63513.1| 749|Homo sapiens small G protein signali... 33 1.5
AB196956-1|BAE02561.1| 749|Homo sapiens Rab-GTPase-activating-p... 33 1.5
X63547-1|CAA45110.1| 376|Homo sapiens oncogene protein. 32 2.6
X63546-1|CAA45108.1| 786|Homo sapiens oncogene protein. 32 2.6
BC058890-1|AAH58890.1| 346|Homo sapiens TBC1D3P2 protein protein. 32 2.6
BC029495-1|AAH29495.2| 226|Homo sapiens USP6 protein protein. 32 2.6
AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific prot... 32 2.6
AK123957-1|BAC85735.1| 632|Homo sapiens protein ( Homo sapiens ... 32 2.6
U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein. 31 5.9
D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein. 31 5.9
BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, mem... 31 5.9
BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein. 31 5.9
BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein. 31 5.9
BC075809-1|AAH75809.1| 549|Homo sapiens TBC1 domain family, mem... 31 5.9
BC067854-1|AAH67854.1| 503|Homo sapiens CPAMD8 protein protein. 31 5.9
BC031642-1|AAH31642.1| 526|Homo sapiens TBC1 domain family, mem... 31 5.9
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2... 31 5.9
AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens ... 31 5.9
AK001944-1|BAA91992.1| 526|Homo sapiens protein ( Homo sapiens ... 31 5.9
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein. 31 5.9
AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein. 31 5.9
BC122564-1|AAI22565.1| 632|Homo sapiens TBC1 domain family, mem... 30 7.8
AL591849-3|CAI40161.1| 1178|Homo sapiens novel protein protein. 30 7.8
AL391315-4|CAI39548.1| 1178|Homo sapiens novel protein protein. 30 7.8
>BC014111-1|AAH14111.1| 794|Homo sapiens ecotropic viral
integration site 5-like protein.
Length = 794
Score = 115 bits (277), Expect = 2e-25
Identities = 74/211 (35%), Positives = 102/211 (48%), Gaps = 3/211 (1%)
Frame = +2
Query: 131 LMTDRASTE--KSPELNPNADCRIPTSETIPTPDRALLAKLEEENRRIEADAKNASLTTV 304
L D +S E +P +P +D SE + + LLAKLEE+NR +EAD+K+
Sbjct: 6 LSPDSSSQEALSAPTCSPTSD-----SENLSPDELELLAKLEEQNRLLEADSKSMRSMNG 60
Query: 305 HSRKXXXXXXXXXXXXXXXXHEVETRPTPGTNGEEDLWSLWGRLVSNWESEWKRRNQ-WV 481
R H EED W LWGR+ + WE EW+RR + +
Sbjct: 61 SRRNSGSSLVSSSSASSNLSHL-----------EEDTWILWGRIANEWE-EWRRRKEKLL 108
Query: 482 RDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYIKAKSACEKVIRRDIASHIFRTRFL 661
++L+R+G+PHHFR IVWQLL P K Y+ +K S CEK+IRRDIA F
Sbjct: 109 KELIRKGIPHHFRAIVWQLLCSATDMPVKNQYSELLKMSSPCEKLIRRDIARTYPEHEFF 168
Query: 662 QRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
+ + V + + +VGYCQG
Sbjct: 169 KGQDSLGQEVLFNVMK-AYSLVDREVGYCQG 198
>AL354890-2|CAI21914.1| 810|Homo sapiens ecotropic viral
integration site 5 protein.
Length = 810
Score = 113 bits (273), Expect = 5e-25
Identities = 70/206 (33%), Positives = 106/206 (51%)
Frame = +2
Query: 137 TDRASTEKSPELNPNADCRIPTSETIPTPDRALLAKLEEENRRIEADAKNASLTTVHSRK 316
T ++T +P L+P++ ++ D LLAKLEE+NR +E D+K SL +V+ +
Sbjct: 59 TSSSTTLSTPALSPSSPSQLSPD------DLELLAKLEEQNRLLETDSK--SLRSVNGSR 110
Query: 317 XXXXXXXXXXXXXXXXHEVETRPTPGTNGEEDLWSLWGRLVSNWESEWKRRNQWVRDLVR 496
+ + ++ EED W LWGR+V+ WE K++ + V++LV
Sbjct: 111 RNSGSSLVSS---------SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVH 161
Query: 497 QGVPHHFRGIVWQLLAGVDTSPEKKLYASYIKAKSACEKVIRRDIASHIFRTRFLQRERW 676
+G+PHHFR IVWQLL + P K Y+ +K S CEK+IRRDIA F + +
Sbjct: 162 KGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDS 221
Query: 677 PRPGVFIQCDEGVFFCTIEKVGYCQG 754
V + + +VGYCQG
Sbjct: 222 LGQEVLFNVMK-AYSLVDREVGYCQG 246
>AL133332-1|CAC19437.2| 810|Homo sapiens ecotropic viral
integration site 5 protein.
Length = 810
Score = 113 bits (273), Expect = 5e-25
Identities = 70/206 (33%), Positives = 106/206 (51%)
Frame = +2
Query: 137 TDRASTEKSPELNPNADCRIPTSETIPTPDRALLAKLEEENRRIEADAKNASLTTVHSRK 316
T ++T +P L+P++ ++ D LLAKLEE+NR +E D+K SL +V+ +
Sbjct: 59 TSSSTTLSTPALSPSSPSQLSPD------DLELLAKLEEQNRLLETDSK--SLRSVNGSR 110
Query: 317 XXXXXXXXXXXXXXXXHEVETRPTPGTNGEEDLWSLWGRLVSNWESEWKRRNQWVRDLVR 496
+ + ++ EED W LWGR+V+ WE K++ + V++LV
Sbjct: 111 RNSGSSLVSS---------SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVH 161
Query: 497 QGVPHHFRGIVWQLLAGVDTSPEKKLYASYIKAKSACEKVIRRDIASHIFRTRFLQRERW 676
+G+PHHFR IVWQLL + P K Y+ +K S CEK+IRRDIA F + +
Sbjct: 162 KGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDS 221
Query: 677 PRPGVFIQCDEGVFFCTIEKVGYCQG 754
V + + +VGYCQG
Sbjct: 222 LGQEVLFNVMK-AYSLVDREVGYCQG 246
>AF042345-1|AAC16041.1| 607|Homo sapiens truncated EVI5 protein.
Length = 607
Score = 109 bits (262), Expect = 1e-23
Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Frame = +2
Query: 137 TDRASTEKSPELNPNADCRIPTSETIPTPD-RALLAKLEEENRRIEADAKNASLTTVHSR 313
T ++T +P L+P++ ++ +PD LLAKLEE+N +E D+K SL +V+
Sbjct: 59 TSSSTTLSTPALSPSSPSQL-------SPDVLELLAKLEEQNILLETDSK--SLRSVNGS 109
Query: 314 KXXXXXXXXXXXXXXXXHEVETRPTPGTNGEEDLWSLWGRLVSNWESEWKRRNQWVRDLV 493
+ + + ++ EED W LWGR+V+ WE K++ + V++LV
Sbjct: 110 RRNSGSSLVSS---------SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELV 160
Query: 494 RQGVPHHFRGIVWQLLAGVDTSPEKKLYASYIKAKSACEKVIRRDIASHIFRTRFLQRER 673
+G+PHHFR IVWQLL + P K Y+ +K S CEK+IRRDIA F + +
Sbjct: 161 HKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKD 220
Query: 674 WPRPGVFIQCDEGVFFCTIEKVGYCQG 754
V + + +VGYCQG
Sbjct: 221 SLGQEVLFNVMK-AYSLVDREVGYCQG 246
>AF008915-1|AAC16031.1| 810|Homo sapiens EVI-5 homolog protein.
Length = 810
Score = 109 bits (262), Expect = 1e-23
Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Frame = +2
Query: 137 TDRASTEKSPELNPNADCRIPTSETIPTPD-RALLAKLEEENRRIEADAKNASLTTVHSR 313
T ++T +P L+P++ ++ +PD LLAKLEE+N +E D+K SL +V+
Sbjct: 59 TSSSTTLSTPALSPSSPSQL-------SPDVLELLAKLEEQNILLETDSK--SLRSVNGS 109
Query: 314 KXXXXXXXXXXXXXXXXHEVETRPTPGTNGEEDLWSLWGRLVSNWESEWKRRNQWVRDLV 493
+ + + ++ EED W LWGR+V+ WE K++ + V++LV
Sbjct: 110 RRNSGSSLVSS---------SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELV 160
Query: 494 RQGVPHHFRGIVWQLLAGVDTSPEKKLYASYIKAKSACEKVIRRDIASHIFRTRFLQRER 673
+G+PHHFR IVWQLL + P K Y+ +K S CEK+IRRDIA F + +
Sbjct: 161 HKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKD 220
Query: 674 WPRPGVFIQCDEGVFFCTIEKVGYCQG 754
V + + +VGYCQG
Sbjct: 221 SLGQEVLFNVMK-AYSLVDREVGYCQG 246
>Z99127-7|CAI18937.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AY364260-1|AAQ76819.1| 468|Homo sapiens HHL protein.
Length = 468
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 160 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 218
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 219 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 275
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 219 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 264
>AL591108-1|CAH70225.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AL161671-6|CAI16281.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AL136377-4|CAI22935.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AL031286-3|CAI22382.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AL022400-4|CAI22878.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AL022171-4|CAI20384.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>AK095838-1|BAC04635.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ38519 fis, clone HCHON2000751, moderately
similar to Rab6 GTPase activating protein. ).
Length = 815
Score = 53.6 bits (123), Expect = 7e-07
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV-DTSPEKKLYA 580
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG D Y
Sbjct: 507 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYR 565
Query: 581 SYIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I SA E VI RDI + F + ++ C + E +GYCQG
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICK--AYSVYDEDIGYCQG 622
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 585 ILRRNQPARRSYVVTSL-RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
IL A+ S + + RT+ HD+FK+ G GQESL+ + KAYS
Sbjct: 566 ILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS 611
>BC054492-1|AAH54492.1| 997|Homo sapiens RABGAP1 protein protein.
Length = 997
Score = 53.2 bits (122), Expect = 1e-06
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 407 EDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE-KKLYAS 583
E + WG L+S W R + + LVR GVP RG VWQLLAG + + Y
Sbjct: 463 EKILETWGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRI 522
Query: 584 YIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I +S + I RDI + F + ++ C + E++GYCQG
Sbjct: 523 LITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICK--AYSVYDEEIGYCQG 578
Score = 39.1 bits (87), Expect = 0.017
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
RT+ HD+FK+ G GQ+SL+ + KAYS
Sbjct: 540 RTFPAHDYFKDTGGDGQDSLYKICKAYS 567
>AL365338-3|CAH70298.1| 997|Homo sapiens RAB GTPase activating
protein 1 protein.
Length = 997
Score = 53.2 bits (122), Expect = 1e-06
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 407 EDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE-KKLYAS 583
E + WG L+S W R + + LVR GVP RG VWQLLAG + + Y
Sbjct: 463 EKILETWGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRI 522
Query: 584 YIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I +S + I RDI + F + ++ C + E++GYCQG
Sbjct: 523 LITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICK--AYSVYDEEIGYCQG 578
Score = 39.1 bits (87), Expect = 0.017
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
RT+ HD+FK+ G GQ+SL+ + KAYS
Sbjct: 540 RTFPAHDYFKDTGGDGQDSLYKICKAYS 567
>AJ011679-1|CAB40267.2| 997|Homo sapiens Rab6 GTPase activating
protein, GAPCenA protein.
Length = 997
Score = 53.2 bits (122), Expect = 1e-06
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 407 EDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE-KKLYAS 583
E + WG L+S W R + + LVR GVP RG VWQLLAG + + Y
Sbjct: 463 EKILETWGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRI 522
Query: 584 YIKAKSACEKVIRRDI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
I +S + I RDI + F + ++ C + E++GYCQG
Sbjct: 523 LITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICK--AYSVYDEEIGYCQG 578
Score = 39.1 bits (87), Expect = 0.017
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYS 719
RT+ HD+FK+ G GQ+SL+ + KAYS
Sbjct: 540 RTFPAHDYFKDTGGDGQDSLYKICKAYS 567
>AK131449-1|BAD18594.1| 599|Homo sapiens d) (GAPCENA). protein.
Length = 599
Score = 52.0 bits (119), Expect = 2e-06
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 407 EDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE-KKLYAS 583
E + WG L+S W R + + LVR GVP RG VWQLLAG + + Y
Sbjct: 467 EKILETWGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRI 526
Query: 584 YIKAKSACEKVIRRDI 631
I +S + I RDI
Sbjct: 527 LITKESPQDSAITRDI 542
Score = 37.1 bits (82), Expect = 0.068
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKKS 740
RT+ HD+FK+ G GQ+SL+ + K + + K S
Sbjct: 544 RTFPAHDYFKDTGGDGQDSLYKICKVFHVKKKKDS 578
>BC041888-1|AAH41888.1| 605|Homo sapiens RABGAP1L protein protein.
Length = 605
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 470 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 516
>AL157958-1|CAB76100.1| 582|Homo sapiens hypothetical protein
protein.
Length = 582
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 519 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 565
>AL031286-2|CAI22381.1| 605|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 605
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 470 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 516
>AL031286-1|CAI22380.1| 582|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 582
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 519 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 565
>AL022400-3|CAI22877.1| 605|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 605
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 470 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 516
>AL022400-2|CAI22876.1| 582|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 582
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 519 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 565
>AL022400-1|CAI22875.1| 252|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 252
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 154 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 200
>AL022171-3|CAI20383.1| 605|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 605
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 470 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 516
>AL022171-2|CAI20382.1| 582|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 582
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 519 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 565
>AL022171-1|CAI20381.1| 252|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 252
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 154 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 200
>AL021069-2|CAI23486.1| 605|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 605
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 470 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 516
>AL021069-1|CAI23485.1| 252|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 252
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 404 EEDLWSLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
E+ L+S WG L+ W S R + + LV+ GVP R VWQLLAG
Sbjct: 154 EKILYS-WGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAG 200
>D13644-1|BAA02807.2| 838|Homo sapiens KIAA0019 protein protein.
Length = 838
Score = 39.5 bits (88), Expect = 0.013
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE--KKLYASYIKAK 598
W +++ WE ++K ++ R + + G+P RG VW LL + E + LY+
Sbjct: 87 WLKMLKGWE-KYKNTEKFHRRIYK-GIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRA 144
Query: 599 SACEKVIRR-DI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
C IR+ D+ + FR + R+R+ + + +VGYCQG
Sbjct: 145 RGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQG 198
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 582 HILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
H R P R + RT+ +H F+++ G+ Q+SLF+V+ AYS
Sbjct: 142 HRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYS 187
>BC042943-1|AAH42943.1| 828|Homo sapiens USP6 N-terminal like
protein.
Length = 828
Score = 39.5 bits (88), Expect = 0.013
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE--KKLYASYIKAK 598
W +++ WE ++K ++ R + + G+P RG VW LL + E + LY+
Sbjct: 77 WLKMLKGWE-KYKNTEKFHRRIYK-GIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRA 134
Query: 599 SACEKVIRR-DI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
C IR+ D+ + FR + R+R+ + + +VGYCQG
Sbjct: 135 RGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQG 188
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 582 HILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
H R P R + RT+ +H F+++ G+ Q+SLF+V+ AYS
Sbjct: 132 HRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYS 177
>AL590416-1|CAI16966.1| 828|Homo sapiens USP6 N-terminal like
protein.
Length = 828
Score = 39.5 bits (88), Expect = 0.013
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE--KKLYASYIKAK 598
W +++ WE ++K ++ R + + G+P RG VW LL + E + LY+
Sbjct: 77 WLKMLKGWE-KYKNTEKFHRRIYK-GIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRA 134
Query: 599 SACEKVIRR-DI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
C IR+ D+ + FR + R+R+ + + +VGYCQG
Sbjct: 135 RGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQG 188
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 582 HILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
H R P R + RT+ +H F+++ G+ Q+SLF+V+ AYS
Sbjct: 132 HRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYS 177
>AL512631-1|CAH70484.1| 828|Homo sapiens USP6 N-terminal like
protein.
Length = 828
Score = 39.5 bits (88), Expect = 0.013
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPE--KKLYASYIKAK 598
W +++ WE ++K ++ R + + G+P RG VW LL + E + LY+
Sbjct: 77 WLKMLKGWE-KYKNTEKFHRRIYK-GIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRA 134
Query: 599 SACEKVIRR-DI-ASHIFRTRFLQRERWPRPGVFIQCDEGVFFCTIEKVGYCQG 754
C IR+ D+ + FR + R+R+ + + +VGYCQG
Sbjct: 135 RGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQG 188
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 582 HILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
H R P R + RT+ +H F+++ G+ Q+SLF+V+ AYS
Sbjct: 132 HRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYS 177
>BC041167-1|AAH41167.1| 678|Homo sapiens TBC1 domain family, member
14 protein.
Length = 678
Score = 38.3 bits (85), Expect = 0.030
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 434 LVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLY 577
++ NWE+ W R VRDL QG+P RG VW L G + + +L+
Sbjct: 366 ILPNWETMWCSRK--VRDLWWQGIPPSVRGKVWSLAIGNELNITHELF 411
>AL833868-1|CAD38726.1| 381|Homo sapiens hypothetical protein
protein.
Length = 381
Score = 38.3 bits (85), Expect = 0.030
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 434 LVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLY 577
++ NWE+ W R VRDL QG+P RG VW L G + + +L+
Sbjct: 69 ILPNWETMWCSRK--VRDLWWQGIPPSVRGKVWSLAIGNELNITHELF 114
>AB037743-1|BAA92560.1| 702|Homo sapiens KIAA1322 protein protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.030
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 434 LVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLY 577
++ NWE+ W R VRDL QG+P RG VW L G + + +L+
Sbjct: 390 ILPNWETMWCSRK--VRDLWWQGIPPSVRGKVWSLAIGNELNITHELF 435
>BC126979-1|AAI26980.1| 432|Homo sapiens TBC1D1 protein protein.
Length = 432
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 555 RRPKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
++PK +L++ + + ++ RT+ H +F + G GQ SL+N++KAYS
Sbjct: 91 QQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYS 145
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 EDLWSLWGRLVSN-WESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
+++ ++W +++S S+ K + + V QGVP H RG +W+ LA
Sbjct: 32 KEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 78
>BC053648-1|AAH53648.1| 891|Homo sapiens TBC1D1 protein protein.
Length = 891
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 555 RRPKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
++PK +L++ + + ++ RT+ H +F + G GQ SL+N++KAYS
Sbjct: 550 QQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYS 604
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 EDLWSLWGRLVSN-WESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
+++ ++W +++S S+ K + + V QGVP H RG +W+ LA
Sbjct: 491 KEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 537
>BC050321-1|AAH50321.3| 1168|Homo sapiens TBC1 (tre-2/USP6, BUB2,
cdc16) domain family, member 1 protein.
Length = 1168
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 555 RRPKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
++PK +L++ + + ++ RT+ H +F + G GQ SL+N++KAYS
Sbjct: 827 QQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYS 881
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 EDLWSLWGRLVSN-WESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
+++ ++W +++S S+ K + + V QGVP H RG +W+ LA
Sbjct: 768 KEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 814
>BC014529-1|AAH14529.1| 900|Homo sapiens TBC1D1 protein protein.
Length = 900
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 555 RRPKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
++PK +L++ + + ++ RT+ H +F + G GQ SL+N++KAYS
Sbjct: 559 QQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYS 613
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 EDLWSLWGRLVSN-WESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
+++ ++W +++S S+ K + + V QGVP H RG +W+ LA
Sbjct: 500 KEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 546
>AK027355-1|BAB55057.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ14449 fis, clone HEMBB1001684. ).
Length = 674
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 555 RRPKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
++PK +L++ + + ++ RT+ H +F + G GQ SL+N++KAYS
Sbjct: 333 QQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYS 387
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 EDLWSLWGRLVSN-WESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
+++ ++W +++S S+ K + + V QGVP H RG +W+ LA
Sbjct: 274 KEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 320
>AB029031-1|BAA83060.1| 763|Homo sapiens KIAA1108 protein protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 555 RRPKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
++PK +L++ + + ++ RT+ H +F + G GQ SL+N++KAYS
Sbjct: 422 QQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYS 476
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 407 EDLWSLWGRLVSN-WESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
+++ ++W +++S S+ K + + V QGVP H RG +W+ LA
Sbjct: 363 KEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 409
>BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein.
Length = 1299
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 561 PKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
P SY +L++ + + +V RT+ H +F + G GQ SLFN++KAYS
Sbjct: 949 PDISYK-ELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYS 1000
>AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, member 4
protein.
Length = 1298
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 561 PKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
P SY +L++ + + +V RT+ H +F + G GQ SLFN++KAYS
Sbjct: 948 PDISYK-ELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYS 999
>AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, member 4
protein.
Length = 1298
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 561 PKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
P SY +L++ + + +V RT+ H +F + G GQ SLFN++KAYS
Sbjct: 948 PDISYK-ELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYS 999
>AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein.
Length = 1348
Score = 36.3 bits (80), Expect = 0.12
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 561 PKRSYTPHILRRNQPARRSYVVTSLRTYSEHDFFKEKDGLGQESLFNVMKAYS 719
P SY +L++ + + +V RT+ H +F + G GQ SLFN++KAYS
Sbjct: 998 PDISYK-ELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYS 1049
>BC062999-1|AAH62999.1| 446|Homo sapiens TBC1 domain family, member
10C protein.
Length = 446
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
W + S+WE RR + V+ R+G+P R W LL G
Sbjct: 67 WVEMTSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCG 107
>BC036873-1|AAH36873.3| 446|Homo sapiens TBC1 domain family, member
10C protein.
Length = 446
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
W + S+WE RR + V+ R+G+P R W LL G
Sbjct: 67 WVEMTSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCG 107
>CT841514-1|CAJ86444.1| 508|Homo sapiens dJ130H16.2 protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 84 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 126
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 160 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 193
>BC150214-1|AAI50215.1| 508|Homo sapiens TBC1 domain family, member
10A protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 84 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 126
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 160 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 193
>BC150187-1|AAI50188.1| 508|Homo sapiens TBC1 domain family, member
10A protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 84 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 126
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 160 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 193
>BC142940-1|AAI42941.1| 508|Homo sapiens TBC1 domain family, member
10A protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 84 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 126
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 160 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 193
>AK074656-1|BAC11117.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ90175 fis, clone MAMMA1000496, weakly similar to
MIC1 PROTEIN. ).
Length = 508
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 84 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 126
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 160 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 193
>AF331038-1|AAK35048.1| 508|Homo sapiens EPI64 protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 84 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 126
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 160 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 193
>AC004997-3|AAC23434.1| 438|Homo sapiens WUGSC:H_DJ130H16.2
protein.
Length = 438
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAG 547
S W +++NW+ ++++ +R ++G+P RG WQ L+G
Sbjct: 14 SKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRAWQYLSG 56
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 90 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 123
>AL355341-2|CAH70583.2| 775|Homo sapiens TBC1 domain family, member
12 protein.
Length = 775
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 422 LW-GRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYI 589
+W ++ NWE R + VR+L QG+P RG VW L G + + +LY ++
Sbjct: 459 IWINEILPNWEV--MRSTRRVRELWWQGLPPSVRGKVWSLAVGNELNITPELYEIFL 513
>AL138759-3|CAH70223.2| 775|Homo sapiens TBC1 domain family, member
12 protein.
Length = 775
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 422 LW-GRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYI 589
+W ++ NWE R + VR+L QG+P RG VW L G + + +LY ++
Sbjct: 459 IWINEILPNWEV--MRSTRRVRELWWQGLPPSVRGKVWSLAVGNELNITPELYEIFL 513
>AB011180-1|BAA25534.1| 775|Homo sapiens KIAA0608 protein protein.
Length = 775
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 422 LW-GRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYI 589
+W ++ NWE R + VR+L QG+P RG VW L G + + +LY ++
Sbjct: 459 IWINEILPNWEV--MRSTRRVRELWWQGLPPSVRGKVWSLAVGNELNITPELYEIFL 513
>BC098419-1|AAH98419.1| 668|Homo sapiens TBC1D10B protein protein.
Length = 668
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
W + SNW+ RR Q V+ R+G+P R WQ L+
Sbjct: 195 WLDMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLS 234
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFAR 728
R + H+ F + G GQ+ L+ ++KAY+ R
Sbjct: 269 RQFPFHEMFAARGGHGQQDLYRILKAYTIYR 299
>BC093816-1|AAH93816.1| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
W + SNW+ RR Q V+ R+G+P R WQ L+
Sbjct: 60 WLDMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLS 99
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFAR 728
R + H+ F + G GQ+ L+ ++KAY+ R
Sbjct: 134 RQFPFHEMFAARGGHGQQDLYRILKAYTIYR 164
>BC093814-1|AAH93814.1| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
W + SNW+ RR Q V+ R+G+P R WQ L+
Sbjct: 60 WLDMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLS 99
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFAR 728
R + H+ F + G GQ+ L+ ++KAY+ R
Sbjct: 134 RQFPFHEMFAARGGHGQQDLYRILKAYTIYR 164
>BC072453-1|AAH72453.2| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
W + SNW+ RR Q V+ R+G+P R WQ L+
Sbjct: 60 WLDMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLS 99
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFAR 728
R + H+ F + G GQ+ L+ ++KAY+ R
Sbjct: 134 RQFPFHEMFAARGGHGQQDLYRILKAYTIYR 164
>BC063112-1|AAH63112.1| 622|Homo sapiens TBC1D10B protein protein.
Length = 622
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
W + SNW+ RR Q V+ R+G+P R WQ L+
Sbjct: 149 WLDMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLS 188
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFAR 728
R + H+ F + G GQ+ L+ ++KAY+ R
Sbjct: 223 RQFPFHEMFAARGGHGQQDLYRILKAYTIYR 253
>AK023192-1|BAB14454.1| 533|Homo sapiens protein ( Homo sapiens
cDNA FLJ13130 fis, clone NT2RP3002972, weakly similar to
Halocynthia roretzi mRNA for HrPET-1. ).
Length = 533
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 425 WGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLA 544
W + SNW+ RR Q V+ R+G+P R WQ L+
Sbjct: 60 WLDMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLS 99
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFAR 728
R + H+ F + G GQ+ L+ ++KAY+ R
Sbjct: 134 RQFPFHEMFAARGGHGQQDLYRILKAYTIYR 164
>CR456441-1|CAG30327.1| 749|Homo sapiens dJ1042K10.2 protein.
Length = 749
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 103 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 162
Query: 641 IFRT 652
+ RT
Sbjct: 163 LLRT 166
>BC008078-1|AAH08078.1| 749|Homo sapiens RUN and TBC1 domain
containing 3 protein.
Length = 749
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 103 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 162
Query: 641 IFRT 652
+ RT
Sbjct: 163 LLRT 166
>AY308849-1|AAQ81879.1| 749|Homo sapiens merlin binding protein
protein.
Length = 749
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 103 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 162
Query: 641 IFRT 652
+ RT
Sbjct: 163 LLRT 166
>AL022238-3|CAA18266.1| 777|Homo sapiens protein ( Human DNA
sequence from clone RP5-1042K10 on chromosome
22q13.1-13.2. ).
Length = 777
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 103 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 162
Query: 641 IFRT 652
+ RT
Sbjct: 163 LLRT 166
>AK131086-1|BAC85136.1| 217|Homo sapiens FLJ00288 protein protein.
Length = 217
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 636 RTYSEHDFFKEKDGLGQESLFNVMKAYSFARSKK 737
R + H+ F + G GQ+ LF V+KAY+ R ++
Sbjct: 21 RQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEE 54
>AK000006-1|BAA92231.1| 401|Homo sapiens FLJ00006 protein protein.
Length = 401
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 47 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 106
Query: 641 IFRT 652
+ RT
Sbjct: 107 LLRT 110
>AB275763-1|BAF63513.1| 749|Homo sapiens small G protein signaling
modulator 3 protein protein.
Length = 749
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 103 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 162
Query: 641 IFRT 652
+ RT
Sbjct: 163 LLRT 166
>AB196956-1|BAE02561.1| 749|Homo sapiens
Rab-GTPase-activating-protein-like protein protein.
Length = 749
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG-VDTSPEKKL-YASYIKAKSACEKVIRRDIASH 640
R++ +R LV G+PH R +W L+G + +L Y +K S E + + I
Sbjct: 103 RSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKD 162
Query: 641 IFRT 652
+ RT
Sbjct: 163 LLRT 166
>X63547-1|CAA45110.1| 376|Homo sapiens oncogene protein.
Length = 376
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV 550
S W ++ WE+ +K ++ + D V +G+P + RG VW +L +
Sbjct: 75 SKWMEMLGEWET-YKHSSKLI-DRVYKGIPMNIRGPVWSVLLNI 116
>X63546-1|CAA45108.1| 786|Homo sapiens oncogene protein.
Length = 786
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV 550
S W ++ WE+ +K ++ + D V +G+P + RG VW +L +
Sbjct: 75 SKWMEMLGEWET-YKHSSKLI-DRVYKGIPMNIRGPVWSVLLNI 116
>BC058890-1|AAH58890.1| 346|Homo sapiens TBC1D3P2 protein protein.
Length = 346
Score = 31.9 bits (69), Expect = 2.6
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYI--- 589
S W +++ W++ +K + + D QG+P + RG +W +L ++ K I
Sbjct: 76 SKWVKMLGEWDT-YKNSRKLI-DRAYQGIPMNIRGPMWSVLLNIEEIKLKNPGRYQIMKE 133
Query: 590 KAKSACEKVIRRDI-ASHIFRTRFLQRERW 676
K K + E + + D+ S R R+R+
Sbjct: 134 KGKRSSEHIQQMDLDVSGTLRRHIFFRDRY 163
>BC029495-1|AAH29495.2| 226|Homo sapiens USP6 protein protein.
Length = 226
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV 550
S W ++ WE+ +K ++ + D V +G+P + RG VW +L +
Sbjct: 136 SKWMEMLGEWET-YKHSSKLI-DRVYKGIPMNIRGPVWSVLLNI 177
>AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific
protease USP6 protein.
Length = 1406
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGV 550
S W ++ WE+ +K ++ + D V +G+P + RG VW +L +
Sbjct: 75 SKWMEMLGEWET-YKHSSKLI-DRVYKGIPMNIRGPVWSVLLNI 116
>AK123957-1|BAC85735.1| 632|Homo sapiens protein ( Homo sapiens
cDNA FLJ41963 fis, clone PUAEN2006328, moderately
similar to Homo sapiens TBC1 domain family, member 8
(with GRAM ).
Length = 632
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAGV 550
R + RDLV +G+P RG +W L +GV
Sbjct: 476 RTKKTRDLVVRGIPETLRGELWMLFSGV 503
>U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein.
Length = 479
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 235 SRQAGGRKPS----YR--G*CEERLAHYRPQSEELRHITDIPRFRHKLKS*GRNAPNSWD 396
SRQ G R PS Y+ G E + + +R + R T R RH S GRN SWD
Sbjct: 380 SRQRGRRNPSPDHTYKRNGESERKKSSHRGKKSHKR--TSKSRERHNSPSRGRNRHRSWD 437
Query: 397 *WRR 408
RR
Sbjct: 438 QGRR 441
>D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein.
Length = 479
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 235 SRQAGGRKPS----YR--G*CEERLAHYRPQSEELRHITDIPRFRHKLKS*GRNAPNSWD 396
SRQ G R PS Y+ G E + + +R + R T R RH S GRN SWD
Sbjct: 380 SRQRGRRNPSPDHTYKRNGESERKKSSHRGKKSHKR--TSKSRERHNSPSRGRNRHRSWD 437
Query: 397 *WRR 408
RR
Sbjct: 438 QGRR 441
>BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, member
9 (with GRAM domain) protein.
Length = 1266
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG 547
R + R+LV +G+P RG +W LL+G
Sbjct: 504 RTEKTRELVLKGIPESMRGELWLLLSG 530
>BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 235 SRQAGGRKPS----YR--G*CEERLAHYRPQSEELRHITDIPRFRHKLKS*GRNAPNSWD 396
SRQ G R PS Y+ G E + + +R + R T R RH S GRN SWD
Sbjct: 380 SRQRGRRNPSPDHTYKRNGESERKKSSHRGKKSHKR--TSKSRERHNSPSRGRNRHRSWD 437
Query: 397 *WRR 408
RR
Sbjct: 438 QGRR 441
>BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 235 SRQAGGRKPS----YR--G*CEERLAHYRPQSEELRHITDIPRFRHKLKS*GRNAPNSWD 396
SRQ G R PS Y+ G E + + +R + R T R RH S GRN SWD
Sbjct: 380 SRQRGRRNPSPDHTYKRNGESERKKSSHRGKKSHKR--TSKSRERHNSPSRGRNRHRSWD 437
Query: 397 *WRR 408
RR
Sbjct: 438 QGRR 441
>BC075809-1|AAH75809.1| 549|Homo sapiens TBC1 domain family, member
3G protein.
Length = 549
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 419 SLWGRLVSNWESEWKRRNQWVRDLVRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYI--- 589
S W ++ +WE ++K + + D +G+P + RG +W +L ++ K I
Sbjct: 76 SKWVDMLGDWE-KYKSSRKLI-DRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKE 133
Query: 590 KAKSACEKV--IRRDIASHIFRTRFLQRERW 676
K K + E + I RDI+ + R F R+R+
Sbjct: 134 KGKRSSEHIQRIDRDISGTLRRHMFF-RDRY 163
>BC067854-1|AAH67854.1| 503|Homo sapiens CPAMD8 protein protein.
Length = 503
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 479 VRDLVRQGVPHHFRG--IVWQLLAGVDTSPE 565
VRD++ VP HFRG +W ++ VD S +
Sbjct: 300 VRDMIPADVPEHFRGRVSIWAMVTSVDGSQQ 330
>BC031642-1|AAH31642.1| 526|Homo sapiens TBC1 domain family, member
19 protein.
Length = 526
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 491 VRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYIK 592
+RQG P R +W L+ + + PE LY +K
Sbjct: 248 IRQGSPTALRAELWALILNISSQPEDVLYYEQLK 281
>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
alpha-2-macroglobulin domain containing 8 protein.
Length = 1885
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 479 VRDLVRQGVPHHFRG--IVWQLLAGVDTSPE 565
VRD++ VP HFRG +W ++ VD S +
Sbjct: 300 VRDMIPADVPEHFRGRVSIWAMVTSVDGSQQ 330
>AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens
cDNA FLJ45076 fis, clone BRAWH3027574, weakly similar
to Homo sapiens vascular Rab-GAP/TBC-containing (VRP).
).
Length = 1015
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG 547
R + R+LV +G+P RG +W LL+G
Sbjct: 351 RTEKTRELVLKGIPESMRGELWLLLSG 377
>AK001944-1|BAA91992.1| 526|Homo sapiens protein ( Homo sapiens
cDNA FLJ11082 fis, clone PLACE1005206. ).
Length = 526
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 491 VRQGVPHHFRGIVWQLLAGVDTSPEKKLYASYIK 592
+RQG P R +W L+ + + PE LY +K
Sbjct: 248 IRQGSPTALRAELWALILNISSQPEDVLYYEQLK 281
>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
Length = 1884
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 479 VRDLVRQGVPHHFRG--IVWQLLAGVDTSPE 565
VRD++ VP HFRG +W ++ VD S +
Sbjct: 299 VRDMIPADVPEHFRGRVSIWAMVTSVDGSQQ 329
>AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein.
Length = 1291
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG 547
R + R+LV +G+P RG +W LL+G
Sbjct: 529 RTEKTRELVLKGIPESMRGELWLLLSG 555
>BC122564-1|AAI22565.1| 632|Homo sapiens TBC1 domain family, member
8B (with GRAM domain) protein.
Length = 632
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG 547
R + RDLV +G+P RG +W L +G
Sbjct: 476 RTKKTRDLVVRGIPETLRGELWMLFSG 502
>AL591849-3|CAI40161.1| 1178|Homo sapiens novel protein protein.
Length = 1178
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG 547
R + RDLV +G+P RG +W L +G
Sbjct: 534 RTKKTRDLVVRGIPETLRGELWMLFSG 560
>AL391315-4|CAI39548.1| 1178|Homo sapiens novel protein protein.
Length = 1178
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 467 RNQWVRDLVRQGVPHHFRGIVWQLLAG 547
R + RDLV +G+P RG +W L +G
Sbjct: 534 RTKKTRDLVVRGIPETLRGELWMLFSG 560
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,436,213
Number of Sequences: 237096
Number of extensions: 2617077
Number of successful extensions: 10686
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 10226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10681
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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