Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1864
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 125 2e-29
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 125 2e-29
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 125 2e-29
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 125 2e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 125 2e-29
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 125 2e-29
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 125 2e-29
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 125 2e-29
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 125 2e-29
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 121 2e-28
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 120 6e-28
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 78 4e-15
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 67 6e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 55 3e-08
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.1
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 4.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.1
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 28 4.1
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 28 4.1
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 28 4.1
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 5.5
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 27 5.5
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 27 5.5
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 27 5.5
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 27 5.5
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 27 5.5
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 27 7.2
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 27 7.2
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 27 7.2
Z83744-1|CAB06041.1| 253|Caenorhabditis elegans Hypothetical pr... 27 9.5
L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical pr... 27 9.5
L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 271 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 330
Query: 301 CF 296
CF
Sbjct: 331 CF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 301 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
Query: 301 CF 296
CF
Sbjct: 361 CF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 125 bits (301), Expect = 2e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
Query: 301 CF 296
CF
Sbjct: 375 CF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 121 bits (292), Expect = 2e-28
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEITALAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 315 QKEITALAPT-MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 301 CF 296
CF
Sbjct: 374 CF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 120 bits (289), Expect = 6e-28
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = -1
Query: 481 KKEITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+KEI LAP MKIKIIAPPERKYSVWIGGSILASLSTF QMWISKQEYDESGPSIVHRK
Sbjct: 314 QKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
Query: 301 CF 296
CF
Sbjct: 374 CF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 77.8 bits (183), Expect = 4e-15
Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Frame = -1
Query: 457 PLPMKIKIIAPP---ERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRKC 299
P +K+++ A P ERKY WIGGSIL SL TF QMW+SK EYDESG SIV +KC
Sbjct: 380 PPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = -1
Query: 475 EITALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRKCF 296
E+ +AP KI+I A ER WIGGSI+ASL TF +MW+ K+EY++ G S +H++ F
Sbjct: 315 EMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = -1
Query: 463 LAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSI 314
L P P+ +++I+ ++Y+VW GGS+LAS S F+Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = -1
Query: 445 KIKIIAPPERKYSVWIGGSILASL--STFHQMWISKQEYDESG 323
KI+I APP RK+ V++GG++LA+L W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 469 TALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+AL+ L + KIIA KYS S + ++ + K+E D +G ++ + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 469 TALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+AL+ L + KIIA KYS S + ++ + K+E D +G ++ + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 469 TALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+AL+ L + KIIA KYS S + ++ + K+E D +G ++ + K
Sbjct: 307 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 362
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 237 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 329
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 340 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 239
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 237 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 329
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 469 TALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+AL+ L + KIIA KYS S + ++ + K+E D +G ++ + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 469 TALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+AL+ L + KIIA KYS S + ++ + K+E D +G ++ + K
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 291
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 469 TALAPLPMKIKIIAPPERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRK 302
+AL+ L + KIIA KYS S + ++ + K+E D +G ++ + K
Sbjct: 307 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEK 362
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -2
Query: 387 SSPPSLPSTRCGSRNRSTTSL-APPLYTGS--VSKRTARR-CLQQP 262
+ PP+ PST CGS ++T + A PL + + + RR C+ +P
Sbjct: 280 TKPPAAPSTACGSATCTSTQVCASPLNSTQTCIPRLPDRRYCIDEP 325
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -2
Query: 387 SSPPSLPSTRCGSRNRSTTSL-APPLYTGS--VSKRTARR-CLQQP 262
+ PP+ PST CGS ++T + A PL + + + RR C+ +P
Sbjct: 280 TKPPAAPSTACGSATCTSTQVCASPLNSTQTCIPRLPDRRYCIDEP 325
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 401 PYGVLSLWRSNDLNLHWQWGESCD 472
P VL L NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 401 PYGVLSLWRSNDLNLHWQWGESCD 472
P VL L NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 401 PYGVLSLWRSNDLNLHWQWGESCD 472
P VL L NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 421 ERKYSVWIGGSILASLSTFHQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 260
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -2
Query: 405 YGSVDRSSPPSLPSTRCGSRNRSTTSLAPPLYTGSVSKRTARRCLQQPAAGCSIQA 238
+ S + ++PP P GSR S TSL + S S R QP S QA
Sbjct: 208 HSSPNFAAPPHPPRPMMGSRAGSVTSLDDVNMSQSYSATMPRAYPPQPGRAYSAQA 263
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -2
Query: 405 YGSVDRSSPPSLPSTRCGSRNRSTTSLAPPLYTGSVSKRTARRCLQQPAAGCSIQA 238
+ S + ++PP P GSR S TSL + S S R QP S QA
Sbjct: 208 HSSPNFAAPPHPPRPMMGSRAGSVTSLDDVNMSQSYSATMPRAYPPQPGRAYSAQA 263
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -2
Query: 405 YGSVDRSSPPSLPSTRCGSRNRSTTSLAPPLYTGSVSKRTARRCLQQPAAGCSIQA 238
+ S + ++PP P GSR S TSL + S S R QP S QA
Sbjct: 253 HSSPNFAAPPHPPRPMMGSRAGSVTSLDDVNMSQSYSATMPRAYPPQPGRAYSAQA 308
>Z83744-1|CAB06041.1| 253|Caenorhabditis elegans Hypothetical
protein C06A12.3 protein.
Length = 253
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 414 STPYGSVDRSSPPSLPSTRCGSRNRS 337
STP + SSPPS P+TR +R +S
Sbjct: 2 STP---IPPSSPPSTPTTRANNRTKS 24
>L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical
protein C30A5.10b protein.
Length = 438
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -2
Query: 384 SPPSLPSTRCGSRNRSTTSLAPPLY---TGSVSKRT 286
+P + PST S STT++ PP Y T SV K T
Sbjct: 85 NPSTFPSTTTASTTTSTTTM-PPTYQTTTKSVKKNT 119
>L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical
protein C30A5.10a protein.
Length = 505
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -2
Query: 384 SPPSLPSTRCGSRNRSTTSLAPPLY---TGSVSKRT 286
+P + PST S STT++ PP Y T SV K T
Sbjct: 85 NPSTFPSTTTASTTTSTTTM-PPTYQTTTKSVKKNT 119
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 67 IRFSTYNHHS*DYKKSFGECSTGPAV 144
I F YN S K+ GECST PAV
Sbjct: 516 IAFVEYNSRS-SRKRKAGECSTPPAV 540
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,785,998
Number of Sequences: 27780
Number of extensions: 189758
Number of successful extensions: 532
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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