Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1863
         (329 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.21 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   1.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   4.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    20   7.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 147 STPYGSVDRSSPPSLPSNKCGSRNRS--TTSLAPPLYTGSASKR 22
           S  Y S++ ++PP  P  +  S   +  T S  PPLY    +KR
Sbjct: 720 SISYLSMENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKR 763


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 125 STDPYGVLPLWRSNDLN 175
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 105 LPSNKCGSRNRSTTSLAPPLYTGSA--SKRTA 16
           LP+++C SR  S + + P   +G +  S+R A
Sbjct: 79  LPNSRCNSRESSDSLVQPRCPSGESMLSERAA 110


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 108 SLPSNKCGSRNRSTTSLAPPLYTGSASK 25
           SL S    + N+S+TS  PP +  S SK
Sbjct: 56  SLLSPSGNTPNKSSTSPYPPNHPLSGSK 83


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
          vasopressin-like peptide protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 42 CTMEGPDSSYSCFEIHIC 95
          C   GP  S  CF   IC
Sbjct: 45 CVSCGPGQSGQCFGPSIC 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,691
Number of Sequences: 336
Number of extensions: 2062
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)