Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1857
         (830 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    44   0.005
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    44   0.005
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ...    42   0.014
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    42   0.025
UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep...    39   0.13 
UniRef50_UPI00006CB096 Cluster: hypothetical protein TTHERM_0024...    35   2.2  

>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 44.0 bits (99), Expect = 0.005
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = +3

Query: 9  SXTAVAAALELVDPPGCRNSA 71
          S TAVAAALELVDPPGCRNSA
Sbjct: 3  SSTAVAAALELVDPPGCRNSA 23


>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 44.0 bits (99), Expect = 0.005
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = +3

Query: 9  SXTAVAAALELVDPPGCRNSA 71
          S TAVAAALELVDPPGCRNSA
Sbjct: 2  SSTAVAAALELVDPPGCRNSA 22


>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 89

 Score = 42.3 bits (95), Expect = 0.014
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +3

Query: 9  SXTAVAAALELVDPPGCRNS 68
          S TAVAAALELVDPPGCRNS
Sbjct: 9  SSTAVAAALELVDPPGCRNS 28


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 41.5 bits (93), Expect = 0.025
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +3

Query: 9  SXTAVAAALELVDPPGCRNSA 71
          S  AVAAALELVDPPGCRNSA
Sbjct: 3  SSPAVAAALELVDPPGCRNSA 23


>UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep:
           Calumenin homologue - Ciona intestinalis (Transparent
           sea squirt)
          Length = 308

 Score = 39.1 bits (87), Expect = 0.13
 Identities = 19/26 (73%), Positives = 19/26 (73%)
 Frame = +3

Query: 9   SXTAVAAALELVDPPGCRNSAAADPT 86
           S TAVAAALELVDPPGCR     D T
Sbjct: 122 SSTAVAAALELVDPPGCRLVHEVDET 147


>UniRef50_UPI00006CB096 Cluster: hypothetical protein
           TTHERM_00242030; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00242030 - Tetrahymena
           thermophila SB210
          Length = 449

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +3

Query: 90  SLLKNLILQYKQ*GHTWQ*CLITYKYIGIIYTLANFPFSTLLYR-RHFELIYSNIEISQH 266
           ++LK+ I QYK+  +  Q   +  +   II  + N   + +LY   HFEL   NIEI   
Sbjct: 240 AILKSYIAQYKKSSYVSQLTFVDKESFSIINNMKNSIVNLILYNTSHFELDKKNIEIIAQ 299

Query: 267 INKTSRNKQQTL 302
           + + ++   Q +
Sbjct: 300 VMRENKRYTQII 311


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,798,620
Number of Sequences: 1657284
Number of extensions: 15115502
Number of successful extensions: 40573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40558
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)