Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1855
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48443-1|CAA88358.1|  769|Drosophila melanogaster male-specific ...    29   5.9  
X89241-1|CAA61529.1|  773|Drosophila melanogaster MSL-2 protein.       29   5.9  
L42553-1|AAA75573.1|  773|Drosophila melanogaster RING finger pr...    29   5.9  
AY128426-1|AAM75019.1|  773|Drosophila melanogaster GH22488p pro...    29   5.9  
AE014134-608|AAN10368.1|  773|Drosophila melanogaster CG3241-PB,...    29   5.9  
AE014134-607|AAF51104.1|  773|Drosophila melanogaster CG3241-PA,...    29   5.9  

>Z48443-1|CAA88358.1|  769|Drosophila melanogaster male-specific
           lethal 2 protein.
          Length = 769

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -3

Query: 170 SGCGPYLLRNPHT*GAREYVEHDDLQMLGADRRPKDF*GPTALNDSPALLHPTSD 6
           +GC     +NPH     +YVE D+   L     PKD   P   ++ P +  P  +
Sbjct: 550 AGCHCVCCKNPHK---EDYVESDEDDDLEDFEMPKDVPEPMTQSEEPVVAEPRQE 601


>X89241-1|CAA61529.1|  773|Drosophila melanogaster MSL-2 protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -3

Query: 170 SGCGPYLLRNPHT*GAREYVEHDDLQMLGADRRPKDF*GPTALNDSPALLHPTSD 6
           +GC     +NPH     +YVE D+   L     PKD   P   ++ P +  P  +
Sbjct: 554 AGCHCVCCKNPHK---EDYVESDEDDDLEDFEMPKDVPEPLTQSEEPVVAEPRQE 605


>L42553-1|AAA75573.1|  773|Drosophila melanogaster RING finger
           protein protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -3

Query: 170 SGCGPYLLRNPHT*GAREYVEHDDLQMLGADRRPKDF*GPTALNDSPALLHPTSD 6
           +GC     +NPH     +YVE D+   L     PKD   P   ++ P +  P  +
Sbjct: 554 AGCHCVCCKNPHK---EDYVESDEDDDLEDFEMPKDVPEPMTQSEEPVVAEPRQE 605


>AY128426-1|AAM75019.1|  773|Drosophila melanogaster GH22488p
           protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -3

Query: 170 SGCGPYLLRNPHT*GAREYVEHDDLQMLGADRRPKDF*GPTALNDSPALLHPTSD 6
           +GC     +NPH     +YVE D+   L     PKD   P   ++ P +  P  +
Sbjct: 554 AGCHCVCCKNPHK---EDYVESDEDDDLEDFEMPKDVPEPMTQSEEPVVAEPRQE 605


>AE014134-608|AAN10368.1|  773|Drosophila melanogaster CG3241-PB,
           isoform B protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -3

Query: 170 SGCGPYLLRNPHT*GAREYVEHDDLQMLGADRRPKDF*GPTALNDSPALLHPTSD 6
           +GC     +NPH     +YVE D+   L     PKD   P   ++ P +  P  +
Sbjct: 554 AGCHCVCCKNPHK---EDYVESDEDDDLEDFEMPKDVPEPMTQSEEPVVAEPRQE 605


>AE014134-607|AAF51104.1|  773|Drosophila melanogaster CG3241-PA,
           isoform A protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -3

Query: 170 SGCGPYLLRNPHT*GAREYVEHDDLQMLGADRRPKDF*GPTALNDSPALLHPTSD 6
           +GC     +NPH     +YVE D+   L     PKD   P   ++ P +  P  +
Sbjct: 554 AGCHCVCCKNPHK---EDYVESDEDDDLEDFEMPKDVPEPMTQSEEPVVAEPRQE 605


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,364,044
Number of Sequences: 53049
Number of extensions: 690702
Number of successful extensions: 1652
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)