Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1852
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96...    30   1.2  
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314           27   8.2  

>02_01_0135 +
           967172-967229,968316-968657,968936-969015,969063-969698,
           969819-971527,971563-972514,972821-973273,974303-974497
          Length = 1474

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 465 ILKFFYFFLPLAI*ACFCYTYVFRKRIFFN 554
           ILKF Y FLP+ +  CF Y  +F K   FN
Sbjct: 442 ILKFSYEFLPVHLQHCFSYCSLFPKDHKFN 471


>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
          Length = 1056

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 9   QLYEVRLIDKIRVPSSAFRGKK*QFLSRYNVLINQYAFFNTLSASVP 149
           +L ++R ++ + + ++ F G   +FL  + +L N    FN LS  VP
Sbjct: 569 ELNKLRGLEVLDLSNNKFSGPIPEFLESFQLLKNLNLSFNNLSGMVP 615


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,089,699
Number of Sequences: 37544
Number of extensions: 177362
Number of successful extensions: 314
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)