Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1851
         (690 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0469 + 17864265-17864789,17865648-17865854,17865936-178661...    31   0.86 

>09_04_0469 +
           17864265-17864789,17865648-17865854,17865936-17866175,
           17866705-17866771,17866872-17867015,17867202-17867297,
           17867818-17867975,17868054-17868190,17868551-17868752
          Length = 591

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 597 SGFRRSDLCSQYTHLSVAYLRVIYIYHVSRPNSANKSRNQI 475
           SGF   ++ SQ    S +Y R   +Y + +PNS   S N +
Sbjct: 346 SGFSEQNITSQKYASSSSYARATSVYPIDKPNSNGNSDNHL 386


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,839,010
Number of Sequences: 37544
Number of extensions: 260088
Number of successful extensions: 483
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)