Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1849
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.7  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -2

Query: 273 YLFICLLSSEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV*FVVYKL 112
           Y+F  ++  EF+  F  E   M+  +      F  +  L + ++ L   + +KL
Sbjct: 134 YIFANIMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKL 187


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -2

Query: 273 YLFICLLSSEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV*FVVYKL 112
           Y+F  ++  EF+  F  E   M+  +      F  +  L + ++ L   + +KL
Sbjct: 134 YIFANIMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKL 187


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +2

Query: 512 LTFIFCSITVGRDVKTKRRDVWLFNFMLNNF 604
           L  ++ S  + R ++++  DV+  NF+ + F
Sbjct: 109 LNSLYSSYEITRFIRSRETDVYTHNFVKDIF 139


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 278 LFIYLFVY*VVNFFIYLKRNW*LCLVIIFKCYQIF 174
           LF+    Y VV  F  L   +  C  IIF  + +F
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLF 162


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 581 FNFMLNNFERH 613
           +NF+ +NF+RH
Sbjct: 402 YNFLNHNFDRH 412


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 305 AKLDILHAHSTSVI 346
           AKL++LH H T  +
Sbjct: 245 AKLNVLHLHLTDAV 258


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 597 FNIKLKSHTSRR 562
           F+IKL++ TSRR
Sbjct: 799 FDIKLRNQTSRR 810


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,093
Number of Sequences: 336
Number of extensions: 2609
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)