Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1849
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        29   2.1  
Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81075-6|CAB03049.1|  564|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81070-13|CAB03009.1|  564|Caenorhabditis elegans Hypothetical p...    28   4.9  
Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -3

Query: 296 SMWPEKLFIYLFVY*VVNFFIYLKRNW*LC--LVIIFKCYQIFQQFLPLQ 153
           +M+ EK+F++L+++ ++ FF+ L  +  LC  +    K  +  QQFL  Q
Sbjct: 271 NMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFLDNQ 320


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -3

Query: 296 SMWPEKLFIYLFVY*VVNFFIYLKRNW*LC--LVIIFKCYQIFQQFLPLQ 153
           +M+ EK+F++L+++ ++ FF+ L  +  LC  +    K  +  QQFL  Q
Sbjct: 271 NMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFLDNQ 320


>Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical
           protein Y26G10.2 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 444 YTSIRVTTSLVVIFRLDKCFNIVRWLVSFAIN*IT-EVLCACRISNF 307
           +T +   T  VV+F+  K F  ++W + F I  IT + LC+  + NF
Sbjct: 30  FTFLYPLTYYVVLFKTPKNFGSLKWFLVFHIFSITCQWLCSFLLVNF 76


>Z81075-6|CAB03049.1|  564|Caenorhabditis elegans Hypothetical
           protein F26E4.11 protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = -2

Query: 309 FASILNVA*ETIYLFICLLSSEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV* 130
           F  +L V   T  LF C+ SS  F  F  + V  F+Y++ ++ NF       +SF  L+ 
Sbjct: 221 FDCLLAVFRSTYILFRCISSSRVFS-FNPDSVRHFNYWLELITNFVCELIQMLSFAQLLA 279

Query: 129 F 127
           F
Sbjct: 280 F 280


>Z81070-13|CAB03009.1|  564|Caenorhabditis elegans Hypothetical
           protein F26E4.11 protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = -2

Query: 309 FASILNVA*ETIYLFICLLSSEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV* 130
           F  +L V   T  LF C+ SS  F  F  + V  F+Y++ ++ NF       +SF  L+ 
Sbjct: 221 FDCLLAVFRSTYILFRCISSSRVFS-FNPDSVRHFNYWLELITNFVCELIQMLSFAQLLA 279

Query: 129 F 127
           F
Sbjct: 280 F 280


>Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical
           protein M02B1.4 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 273 YLFICLLSSEFFYLFKEELVIMFSYYI*ML 184
           Y+F+ LL +   YLFK++ + ++ Y + M+
Sbjct: 128 YVFLPLLGANIAYLFKKDKLTLYEYRVSMI 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,731,890
Number of Sequences: 27780
Number of extensions: 219207
Number of successful extensions: 524
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)