Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1847
         (751 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-879|AAF58925.1|  301|Drosophila melanogaster CG1874-PA ...    52   8e-07
AE013599-2159|AAM70941.1|  471|Drosophila melanogaster CG8389-PB...    31   1.7  
AE013599-2158|AAF58078.1|  471|Drosophila melanogaster CG8389-PA...    31   1.7  

>AE013599-879|AAF58925.1|  301|Drosophila melanogaster CG1874-PA
           protein.
          Length = 301

 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = +2

Query: 245 MNLDS-LTLSLSHIHYLVVNLNKKNFKQTSQELNQIVSVYGLEAENQVLRCLLTEAARIA 421
           MN++S L    +HI  LV ++NK+NF ++S+++NQ V  +GLEA+   LR L +    + 
Sbjct: 1   MNVESQLKTPPTHIRNLVKHVNKRNFNESSEQINQFVKEHGLEADRSSLRHLFS----VI 56

Query: 422 WDGDRTTSAATNSIHASLLGQQVGRLAQSSS*INS 526
              D   S  T  + A LLG Q+ R   SSS +++
Sbjct: 57  NFSDLVPS-VTVQLQAKLLGIQLERQLHSSSFVSN 90


>AE013599-2159|AAM70941.1|  471|Drosophila melanogaster CG8389-PB,
           isoform B protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 692 YSHFFVESLLKSQNEKATSSAVVNFNSLDSRFNSAFVG 579
           +   FV  L K Q +  T++ + N NSL   F+  F+G
Sbjct: 36  FGQLFVGELQKMQEDTFTAALITNLNSLALNFSGLFIG 73


>AE013599-2158|AAF58078.1|  471|Drosophila melanogaster CG8389-PA,
           isoform A protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 692 YSHFFVESLLKSQNEKATSSAVVNFNSLDSRFNSAFVG 579
           +   FV  L K Q +  T++ + N NSL   F+  F+G
Sbjct: 36  FGQLFVGELQKMQEDTFTAALITNLNSLALNFSGLFIG 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,302,481
Number of Sequences: 53049
Number of extensions: 582357
Number of successful extensions: 1207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)