Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1846
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = -3

Query: 88  YIPCI*RTHACILFIVQLLFL 26
           Y P + + +AC+L +V++L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 84  YHVFDAHTHAYYLLSNFCSWR 22
           Y V  +H  A+YL   F  WR
Sbjct: 495 YRVIISHVDAWYLDCGFGRWR 515


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 254 VLIYRYCVSTVCAVLTVWCERPVHFQRPFL 343
           V+IY  CV T  +V    C   V + + ++
Sbjct: 130 VIIYSICVQTEKSVFDFLCRHTVEYFQNYI 159


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 255 TSSKNFVSLFTKIARTEEYEIFHTYREYREEVHNVNFFL 139
           T SK  + LF K      Y+IF   ++ +   H+V  FL
Sbjct: 774 TGSK--IHLFVKCVFLMGYQIFDWVQKEQSLAHSVGVFL 810


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 336 GLWKCTGRSHQTVKTAQTVDTQYLYINTSSK 244
           GL++ T  +   +     +DT YL+I+  S+
Sbjct: 276 GLFEITTITAMVMWFGYVIDTMYLFIHIRSR 306


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 336 GLWKCTGRSHQTVKTAQTVDTQYLYINTSSK 244
           GL++ T  +   +     +DT YL+I+  S+
Sbjct: 232 GLFEITTITAMVMWFGYVIDTMYLFIHIRSR 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,991
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)