Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1845
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 110 1e-24
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 109 1e-24
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 104 7e-23
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 81 8e-16
03_01_0081 + 645214-645228,645791-645856,645973-646142,646265-64... 76 3e-14
09_04_0644 + 19181335-19184424 42 6e-04
01_01_0124 - 1145105-1145320,1145480-1145611,1146485-1146562,114... 41 7e-04
02_01_0623 - 4676847-4676879,4676953-4677115,4677467-4677620,467... 40 0.002
02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545... 37 0.016
05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520 36 0.021
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 36 0.028
05_01_0564 - 4919294-4919391,4919491-4919620,4919700-4919789,491... 31 1.1
10_05_0086 + 9025410-9025730,9025974-9026008,9026194-9026279,902... 30 1.9
12_01_0261 - 1917149-1917274,1917809-1917922,1918155-1918331,191... 29 3.2
11_01_0263 - 1998399-1998524,1999055-1999168,1999400-1999576,200... 29 3.2
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 29 3.2
01_01_0608 - 4513604-4513701,4513790-4513919,4514027-4514116,451... 28 5.6
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 28 7.5
04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955 28 7.5
01_01_0522 - 3834551-3835451,3835992-3836572 27 9.9
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 110 bits (264), Expect = 1e-24
Identities = 52/111 (46%), Positives = 69/111 (62%)
Frame = +3
Query: 291 NTALGDMKDISGAMPDAYSPRYVEAAWYAWWEKQGFFKPEYGRKSILDPNPKGNFVMVIP 470
+T G K ++ M YSP VE +WY+WWE G+F + + K FV+V+P
Sbjct: 166 DTPHGQKKFLASQMAKQYSPTAVEKSWYSWWESSGYFGADAA-------SSKPPFVIVLP 218
Query: 471 PPNVTGTLHLGHALTNAVEDALTRWHRMNGRTTLWNPGL*PCRNCSQVVVE 623
PPNVTG LH+GHALT A+ED++ RW RM+G TLW PG+ +QVVVE
Sbjct: 219 PPNVTGALHIGHALTVAIEDSMIRWRRMSGYNTLWVPGVDHAGIATQVVVE 269
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 109 bits (263), Expect = 1e-24
Identities = 52/111 (46%), Positives = 69/111 (62%)
Frame = +3
Query: 291 NTALGDMKDISGAMPDAYSPRYVEAAWYAWWEKQGFFKPEYGRKSILDPNPKGNFVMVIP 470
+T G K ++ M + Y P VE +WYAWWE G+F+ + + K FV+V+P
Sbjct: 84 DTPNGQKKLLAPQMANQYCPSTVEKSWYAWWESSGYFRAD-------SASTKPPFVIVMP 136
Query: 471 PPNVTGTLHLGHALTNAVEDALTRWHRMNGRTTLWNPGL*PCRNCSQVVVE 623
PPNVTG LH+GHALT A+EDA+ RW RM+G LW PG+ +QVVVE
Sbjct: 137 PPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVVVE 187
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 104 bits (249), Expect = 7e-23
Identities = 48/111 (43%), Positives = 67/111 (60%)
Frame = +3
Query: 291 NTALGDMKDISGAMPDAYSPRYVEAAWYAWWEKQGFFKPEYGRKSILDPNPKGNFVMVIP 470
+T G K ++ M Y+P VE +WY+WWE +F + + K FV+++P
Sbjct: 71 DTPAGQKKLLASQMAKQYNPAAVEKSWYSWWESSQYFVADA-------TSSKPPFVIILP 123
Query: 471 PPNVTGTLHLGHALTNAVEDALTRWHRMNGRTTLWNPGL*PCRNCSQVVVE 623
PPNVTG LH+GHA+T A+EDA+ RW RM+G LW PG+ +QVVVE
Sbjct: 124 PPNVTGVLHIGHAITVAIEDAMIRWRRMSGYNALWVPGMDHAGIATQVVVE 174
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 81.0 bits (191), Expect = 8e-16
Identities = 40/81 (49%), Positives = 51/81 (62%)
Frame = +3
Query: 381 WEKQGFFKPEYGRKSILDPNPKGNFVMVIPPPNVTGTLHLGHALTNAVEDALTRWHRMNG 560
WE QGFFKP + R DP FV+ +PPPNVTG+LH+GHA+ +ED + R+ RM G
Sbjct: 26 WESQGFFKPNFDRGG--DP-----FVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYFRMKG 78
Query: 561 RTTLWNPGL*PCRNCSQVVVE 623
R LW PG +Q+VVE
Sbjct: 79 RPALWLPGTDHAGIATQLVVE 99
>03_01_0081 +
645214-645228,645791-645856,645973-646142,646265-646319,
646434-646499,646604-646687,647091-647168,647425-647508,
648000-648302,648402-648572,649098-649288,649406-649808,
650368-650619,650696-651196,651306-651403,651810-651911,
652016-652178
Length = 933
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +3
Query: 462 VIPPPNVTGTLHLGHALTNAVEDALTRWHRMNGRTTLWNPGL*PCRNCSQVVVE 623
V+PPPNVTG LH+GHALT A+EDA+ RW RM+G LW PG+ +QVVVE
Sbjct: 103 VLPPPNVTGALHIGHALTVAIEDAIIRWRRMSGYNALWVPGVDHAGIATQVVVE 156
>09_04_0644 + 19181335-19184424
Length = 1029
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 378 WWEKQGFFKPEYGRKSILDPNPKGNFVMVIPPPNVTGTLHLGHALTNAVEDALTRWHRMN 557
WWE+ F+ E G K P P F P P + G LHLGHA + + + + R+
Sbjct: 27 WWEESKVFEAEPGNKP---PGPGEKFFGNFPYPYMNGLLHLGHAFSLSKLEFGAAYQRLR 83
Query: 558 GRTTL 572
G L
Sbjct: 84 GSNVL 88
>01_01_0124 -
1145105-1145320,1145480-1145611,1146485-1146562,
1147022-1147199,1147269-1147441,1147531-1147632,
1147717-1147794,1148178-1148259,1148343-1148405,
1150196-1150275,1150529-1150723,1150812-1151073,
1151566-1151720,1151799-1151865,1151956-1152179,
1152322-1152451,1153228-1153284,1153396-1153527,
1153758-1154086
Length = 910
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 339 AYSPRYVEAAWYAWWEKQGFFK-PEYGRKSILDPNPKGNFVMVIPPPNVTGTLHLGHALT 515
AY +E W WE+ F+ P+ G + PK + + P P+ G LH+GH L
Sbjct: 64 AYPYDEIEPRWQRHWEEHRTFRTPDIGH-GLDTSKPKCYILDMFPYPSGAG-LHVGHPLG 121
Query: 516 NAVEDALTRWHRMNGRTTL 572
D L+R+ RM G L
Sbjct: 122 YTATDILSRFKRMQGFNVL 140
>02_01_0623 -
4676847-4676879,4676953-4677115,4677467-4677620,
4678413-4678554,4678641-4678706,4679389-4679922
Length = 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 453 FVMVIPPPNVTGTLHLGHALTNAVEDALTRWHRMNGR 563
FV PP TG H GH L +++DA+ R H M GR
Sbjct: 42 FVFYDGPPFATGLPHYGHLLAGSIKDAVARHHAMRGR 78
>02_05_0941 +
32953065-32953089,32954252-32954406,32954486-32954587,
32955089-32955140,32955237-32955349,32955542-32955610,
32955942-32956049,32956517-32956661,32957245-32957476,
32957567-32957853,32957951-32958087,32958520-32958667,
32959464-32959595,32960239-32960367,32960707-32960834,
32960911-32961075,32961462-32961587,32962088-32962161,
32962285-32962534,32962875-32963054,32963128-32963361,
32964771-32964840,32965065-32965177,32965403-32965511,
32965639-32965688,32965823-32965889,32966131-32966203,
32966393-32966448,32966729-32966831,32967377-32967458,
32967717-32967779,32967918-32967977,32968356-32968448,
32968561-32968623,32968699-32968797
Length = 1363
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 384 EKQGFFKPEYGRKSILDPNPKGNFVMVIPPPNVTGTLHLGHALTNAVEDALTRW 545
E Q ++ K + + N FV+ PP G LH+GHAL ++D + R+
Sbjct: 40 ELQKLWEENQVLKRVSERNTGATFVLHDGPPYANGDLHMGHALNKILKDIINRY 93
>05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520
Length = 841
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 381 WEKQGFFKPEYGRKSILDPNPKGNFVMVIPPPNVTGTLHLGHALTNAVEDALTRWHRMNG 560
WE+ F+ + G P+P F P + G LHLGHA T + + +HR++G
Sbjct: 65 WEENKVFEAKAGDTP---PSPGEKFFGNFTYPYMNGMLHLGHAFTLSKLEFAAAYHRLHG 121
Query: 561 RTTL 572
L
Sbjct: 122 SNVL 125
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 453 FVMVIPPPNVTGTLHLGHALTNAVEDALTRWHRMNGR 563
F+ PP TG H GH L ++D +TR M GR
Sbjct: 42 FIFYDGPPFATGLPHYGHILAGTIKDVVTRHQSMRGR 78
>05_01_0564 -
4919294-4919391,4919491-4919620,4919700-4919789,
4919882-4919987,4920087-4920187,4920347-4920442,
4920549-4920648,4920761-4920897,4920980-4921111,
4921222-4921320,4921397-4921594,4921715-4921892,
4922020-4922075,4922168-4922320,4922422-4922514,
4922605-4922706,4922817-4922878,4922995-4923090,
4923354-4923453,4923546-4923617,4923728-4923775,
4923853-4923996
Length = 796
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 411 YGRKSILDPNPK--GNFVMVIPPPNVTGTLHLGHALTNAVEDALTR 542
+ RK IL+ + K G VM PP G LH+GHA ++ L +
Sbjct: 255 HNRKDILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAK 300
>10_05_0086 +
9025410-9025730,9025974-9026008,9026194-9026279,
9026602-9026740,9028504-9028663
Length = 246
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +1
Query: 316 TSVVLCPMPTAPGMLRL--HGMHGG 384
T+VVLCP P A G+ RL HG GG
Sbjct: 17 TTVVLCPDPVAAGVPRLTSHGSTGG 41
>12_01_0261 -
1917149-1917274,1917809-1917922,1918155-1918331,
1919075-1919341
Length = 227
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 TALGDMKDISGAMPDAYSPRYVEAAWYAWW-EKQGFFKPEYGRKSILDPNPKGNFVMVIP 470
TA+ ++D ++P+A R + + AWW EK G + + + DP+ K V P
Sbjct: 39 TAMEMLRDRGYSVPEAEIARTLPE-FRAWWAEKPGIERLAFTTTLVSDPSKKVQLVFCPP 97
Query: 471 PPNVTGTL 494
P T+
Sbjct: 98 EPVKIATI 105
>11_01_0263 -
1998399-1998524,1999055-1999168,1999400-1999576,
2000321-2000587
Length = 227
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 TALGDMKDISGAMPDAYSPRYVEAAWYAWW-EKQGFFKPEYGRKSILDPNPKGNFVMVIP 470
TA+ ++D ++P+A R + + AWW EK G + + + DP+ K V P
Sbjct: 39 TAMEMLRDRGYSVPEAEIARTLPE-FRAWWAEKPGIERLAFTTTLVSDPSKKVQLVFCPP 97
Query: 471 PPNVTGTL 494
P T+
Sbjct: 98 EPVKIATI 105
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 309 MKDISGAMPDAYSPRYVEAAWYAWWEKQGFFKPE--YGRKSI 428
MKD + A+SPR+ +A AWW G + YG K I
Sbjct: 1893 MKDARRSTSRAFSPRFPKAKQEAWWLVLGNIRSSELYGLKRI 1934
>01_01_0608 -
4513604-4513701,4513790-4513919,4514027-4514116,
4514225-4514330,4514442-4514542,4514678-4514773,
4514860-4514959,4515133-4515269,4515563-4515661,
4515740-4515937,4516058-4516235,4516635-4516690,
4516781-4516933,4517248-4517340,4517422-4517523,
4517609-4517650,4517812-4517855,4518087-4518186,
4518323-4518394,4518499-4518621,4519309-4519452
Length = 753
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 411 YGRKSILDPNPK--GNFVMVIPPPNVTGTLHLGHALTNAVEDALTR 542
+ K IL+ + K G VM PP G LH+GHA ++ L +
Sbjct: 256 HNSKEILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAK 301
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 465 IPPPNVTGTLHLGHALTNAVEDALTRWHRMNGRTTLW 575
+PPP +G H G N+ ++ RW R N +++
Sbjct: 441 VPPPTCSGG-HTGFGGNNSARESNNRWVRSNSTVSIY 476
>04_04_0876 - 29005543-29005630,29005841-29006596,29006939-29006955
Length = 286
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/65 (21%), Positives = 28/65 (43%)
Frame = +3
Query: 273 AAVYTANTALGDMKDISGAMPDAYSPRYVEAAWYAWWEKQGFFKPEYGRKSILDPNPKGN 452
AA + ++ +L ++ + A P ++ W W K+ + G LDP GN
Sbjct: 65 AAPFPSHASLRNLHPLIAAYPSRPPRVRLDRRWVVAWIKRLLRVNKTGHSGTLDPKVTGN 124
Query: 453 FVMVI 467
++ +
Sbjct: 125 LIVCV 129
>01_01_0522 - 3834551-3835451,3835992-3836572
Length = 493
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 575 PKCCTPIHSMPPS*CIFNGVGQCMSKMQCS 486
P C P P CIF GV +C +C+
Sbjct: 265 PSSCVPPTIQPVLSCIFRGVHKCHHAKECA 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,477,980
Number of Sequences: 37544
Number of extensions: 382024
Number of successful extensions: 891
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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