Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1845
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.6  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   3.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   3.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.0  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 188 TQSQAGQEERGTSCYERKAREKN 256
           T S+  +EE+ T+  E + REK+
Sbjct: 758 TSSEESREEKATTSLEAEKREKS 780


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -2

Query: 527 FNGVGQCMSKMQCSSDIRGRYNHHEITLR 441
           F G+G C++K+  +  I G Y    ++++
Sbjct: 156 FTGLGNCLTKIFKADGITGLYRGFGVSVQ 184


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -2

Query: 527 FNGVGQCMSKMQCSSDIRGRYNHHEITLR 441
           F G+G C++K+  +  I G Y    ++++
Sbjct: 156 FTGLGNCLTKIFKADGITGLYRGFGVSVQ 184


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 372 YAWWEKQGFF 401
           + WW KQG F
Sbjct: 81  FLWWYKQGMF 90


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 372 YAWWEKQGFF 401
           + WW KQG F
Sbjct: 81  FLWWYKQGMF 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,181
Number of Sequences: 438
Number of extensions: 4092
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)