Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1840
         (431 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KAE3 Cluster: Ferlin, putative; n=4; Plasmodium|Rep: ...    33   2.6  
UniRef50_A0E1T5 Cluster: Chromosome undetermined scaffold_73, wh...    33   3.4  
UniRef50_Q91MY1 Cluster: Putative uncharacterized protein LSDV02...    32   4.5  
UniRef50_UPI0000F215B0 Cluster: PREDICTED: hypothetical protein;...    32   5.9  
UniRef50_A7F2Q8 Cluster: Predicted protein; n=1; Sclerotinia scl...    32   5.9  
UniRef50_Q4WBL2 Cluster: Glucose N-acetyltransferase 1; n=5; Tri...    32   5.9  
UniRef50_Q5LM14 Cluster: Putative uncharacterized protein; n=2; ...    31   7.8  

>UniRef50_A5KAE3 Cluster: Ferlin, putative; n=4; Plasmodium|Rep:
           Ferlin, putative - Plasmodium vivax
          Length = 1696

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 142 FYKSKIRSNYFRREFNRYVFWFEILKREIPSLAPTPAIDLNLKDYSFPVYKNYI*FEIQS 321
           F +S   SNY  + + R  F + +L  + P       +D + +DYS   Y N + F +  
Sbjct: 587 FNESDPLSNYKLKSYVRIPFKYLLLSEKRPKWFSMRNVDTSTQDYSISFYANLVPFHLFK 646

Query: 322 KR 327
           KR
Sbjct: 647 KR 648


>UniRef50_A0E1T5 Cluster: Chromosome undetermined scaffold_73, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_73,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 782

 Score = 32.7 bits (71), Expect = 3.4
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +1

Query: 7   WMYIFIFIGGKNQSSEHNLMIRQMVTIFRDNI*TKLK*FIS*FYNFYKSKIR 162
           W YIFI    K     +  +I  MVTIF+D + TK +  +S F+NF   K++
Sbjct: 301 WDYIFI----KGTVLGYTDLILAMVTIFQDQLLTKDEAELSIFFNFQDQKVK 348


>UniRef50_Q91MY1 Cluster: Putative uncharacterized protein LSDV026;
           n=4; Lumpy skin disease virus|Rep: Putative
           uncharacterized protein LSDV026 - Lumpy skin disease
           virus NI-2490
          Length = 302

 Score = 32.3 bits (70), Expect = 4.5
 Identities = 21/69 (30%), Positives = 36/69 (52%)
 Frame = -3

Query: 222 AF*YFKPKNVPVKFSSKVIGPYFAFVKIVKLANKSFKFSLDVIPENSYHLPNH*VVLATL 43
           AF Y K     +  +S +I      +KI++L NK  K    +  EN+ ++PN+ V+  T+
Sbjct: 185 AFFYKKNNEETLNITSNIIS--IRRLKIIELVNKIIKLKKVMKKENNCYIPNNFVIYDTI 242

Query: 42  VLATNENKN 16
           +   N+N N
Sbjct: 243 L---NKNNN 248


>UniRef50_UPI0000F215B0 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 1582

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 86  IVTICLIIRLCSLLWFLPPMKIKI 15
           ++ ICL +R+C LLW LPP +  I
Sbjct: 561 LMCICLTMRICLLLWPLPPCRSSI 584


>UniRef50_A7F2Q8 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 75

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
 Frame = +1

Query: 157 IRSNYFRR-----EFNRYVFWFEILKREIPSLAPTPAIDLNLKDYS 279
           + S+Y RR     E N     F ++K EIPS APT AI ++ +DYS
Sbjct: 12  LTSSYCRRSSDIEELNSLSTAFGLIKGEIPSTAPTAAILVSDQDYS 57


>UniRef50_Q4WBL2 Cluster: Glucose N-acetyltransferase 1; n=5;
           Trichocomaceae|Rep: Glucose N-acetyltransferase 1 -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 384

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +1

Query: 154 KIRSNYFRREFNRYVFWFEILKREIPSLAPTPAIDLNLKDYSFPVYKNY 300
           +IR+  F   F   + WF   +RE PS AP   ID N  D+S   Y  Y
Sbjct: 40  RIRTWIFFAVFIILILWF---RREAPSPAPVSHIDYNKVDWSRYAYSQY 85


>UniRef50_Q5LM14 Cluster: Putative uncharacterized protein; n=2;
           Rhodobacteraceae|Rep: Putative uncharacterized protein -
           Silicibacter pomeroyi
          Length = 339

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 98  LSLKIVTICLIIRLCSLLWFLPPMK 24
           L L  +T+CL++ + +  WFLPP++
Sbjct: 55  LQLTSLTLCLVLAVAAYTWFLPPLE 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,958,624
Number of Sequences: 1657284
Number of extensions: 6771122
Number of successful extensions: 13682
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13682
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)