Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1839
         (391 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8TLX5 Cluster: Predicted protein; n=1; Methanosarcina ...    33   2.0  
UniRef50_Q6LFL8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  
UniRef50_P68412 Cluster: Short neurotoxin 1; n=17; Colubroidea|R...    31   7.9  

>UniRef50_Q8TLX5 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 127

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 349 IFSIIIYYLQLLHMCCMGQVRQPKTGG 269
           +FSI +Y+L  +H C +G+ R P + G
Sbjct: 50  VFSIFLYFLFFIHFCLLGKGRSPASSG 76


>UniRef50_Q6LFL8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1434

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 186 HCNIRDIF*K*LHRLVCSGNLLDFSASYMIF*ICSGVYF 70
           H N  D+F K ++ ++   N +D S  Y  +  CSG YF
Sbjct: 165 HTNFIDLFFKNINNIIDKSNPIDLSILYHFYVNCSGDYF 203


>UniRef50_P68412 Cluster: Short neurotoxin 1; n=17; Colubroidea|Rep:
           Short neurotoxin 1 - Astrotia stokesii (Stokes's sea
           snake) (Disteira stokesii)
          Length = 60

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 307 CCMGQVRQPKTGGNCLRSSCY 245
           CC  Q  QPKT  NC  +SCY
Sbjct: 3   CCNQQSSQPKTTTNCAGNSCY 23


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,881,207
Number of Sequences: 1657284
Number of extensions: 6367977
Number of successful extensions: 10709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10702
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)