Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1839
(391 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 2.2
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 22 2.2
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 21 5.0
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 5.0
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 5.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 6.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 6.6
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 6.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 6.6
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 20 8.7
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 20 8.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 8.7
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 261 KQFPPVLG*RTCPIQHMCNSCK*YIIILKMRRFYPTRF 374
+Q+P VLG C I+ + Y+ +L + F R+
Sbjct: 103 QQYPWVLGVSLCKIRAYVSEMSSYVSVLTIVAFSMERY 140
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 22.2 bits (45), Expect = 2.2
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -1
Query: 328 YLQLLHMCCMGQ-VRQPKTGGNCLRSSCYC 242
+L + H C + + Q + GG+C C C
Sbjct: 73 WLSINHSACAIRCLAQRRKGGSCRNGVCIC 102
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.0 bits (42), Expect = 5.0
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = -1
Query: 307 CCMGQVRQPKTGGNCLRSSCYC 242
C + K GG+C + C C
Sbjct: 60 CAANCLSLGKAGGHCEKVGCIC 81
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 5.0
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 212 YPVFCAKLIIAIFVTFFKNNYIGWYAR 132
Y V C + A + + NY W AR
Sbjct: 307 YLVMCFVFVFAALLEYAAVNYTYWGAR 333
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.0 bits (42), Expect = 5.0
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = -1
Query: 307 CCMGQVRQPKTGGNCLRSSCYC 242
C + K GG+C + C C
Sbjct: 60 CAANCLSLGKAGGHCEKGVCIC 81
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 6.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 94 KYHIRCTEIQQVSRAYQPM*LFLKNVT 174
K +R I +VSR + P + NVT
Sbjct: 393 KARMRALNIDRVSRVFFPFLFAVLNVT 419
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 6.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 70 KIYT*TYLKYHIRCTEIQQVSRAYQPM 150
KIY T + +RCT + + + P+
Sbjct: 688 KIYLNTMESHEVRCTAVFLLMKTNPPL 714
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 280 KTGGNCLRSSCYC 242
K GG+C + C C
Sbjct: 44 KAGGHCEKGVCIC 56
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 6.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 318 CYTCAVWDKFVSPK 277
CYTC V K +S K
Sbjct: 371 CYTCDVCGKTLSTK 384
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 20.2 bits (40), Expect = 8.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 271 HPFWADELV 297
HPFW D+ V
Sbjct: 173 HPFWDDQRV 181
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 20.2 bits (40), Expect = 8.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 268 NCLRSSCYCYSMK 230
NC ++ YC+S+K
Sbjct: 49 NCTYATKYCHSLK 61
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 245 ITTGPQTVPTR 277
+TTG T+PTR
Sbjct: 254 MTTGTTTIPTR 264
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,231
Number of Sequences: 438
Number of extensions: 2098
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9514659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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