Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1835
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    24   0.92 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    24   0.92 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.7  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 208 MFIIHGH-NLNYFYGSIT*DFFPTYADSLERL 116
           +F +  H N+ ++   +T + FPTYA  L  L
Sbjct: 189 VFHVESHPNITWYQQCVTYNVFPTYAHELTYL 220


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 208 MFIIHGH-NLNYFYGSIT*DFFPTYADSLERL 116
           +F +  H N+ ++   +T + FPTYA  L  L
Sbjct: 189 VFHVESHPNITWYQQCVTYNVFPTYAHELTYL 220


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 386 LYQIIAQIETS*SSCH*NLRYYNCMLIFRCFFFYLFIYST 505
           LY+++  I+   S+    +  + C+  +  FF+  +IY+T
Sbjct: 58  LYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTT 97


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 386 LYQIIAQIETS*SSCH*NLRYYNCMLIFRCFFFYLFIYST 505
           LY+++  I+   S+    +  + C+  +  FF+  +IY+T
Sbjct: 14  LYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTT 53


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = -3

Query: 254 QQEINPCKAMYRIYFDVHYS 195
           ++ + PC  +Y  Y   HY+
Sbjct: 560 EESLQPCNPIYDAYCQKHYA 579


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,365
Number of Sequences: 336
Number of extensions: 2407
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)