Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1834
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003223-1|AAO24978.1|  543|Drosophila melanogaster RE01132p pro...    35   0.097
AY069310-1|AAL39455.1|  406|Drosophila melanogaster LD02349p pro...    35   0.097
AF158371-1|AAD48781.1|  631|Drosophila melanogaster activator pr...    35   0.097
AE014134-2685|AAF53510.1|  631|Drosophila melanogaster CG7664-PA...    35   0.097

>BT003223-1|AAO24978.1|  543|Drosophila melanogaster RE01132p
           protein.
          Length = 543

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +1

Query: 145 GSDGAFVTR*-IQGSIKMMNQEIMCEVEIGTHGAIEID---GDDQVQVGVKYEEIETGQY 312
           GS GA++ R  I+ +   +  E + E+  GT   +EID   G  QV V    EE+E    
Sbjct: 302 GSSGAYIPREVIEHTDNFVRSEDLEELG-GTVSYVEIDEMTGQQQVVVCSSIEELEADAA 360

Query: 313 EEYITDDQ-YEEVEAASH 363
            E IT+DQ +EEV  +S+
Sbjct: 361 AEIITEDQVHEEVILSSN 378


>AY069310-1|AAL39455.1|  406|Drosophila melanogaster LD02349p
           protein.
          Length = 406

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +1

Query: 145 GSDGAFVTR*-IQGSIKMMNQEIMCEVEIGTHGAIEID---GDDQVQVGVKYEEIETGQY 312
           GS GA++ R  I+ +   +  E + E+  GT   +EID   G  QV V    EE+E    
Sbjct: 77  GSSGAYIPREVIEHTDNFVRSEDLEELG-GTVSYVEIDEMTGQQQVVVCSSIEELEADAA 135

Query: 313 EEYITDDQ-YEEVEAASH 363
            E IT+DQ +EEV  +S+
Sbjct: 136 AEIITEDQVHEEVILSSN 153


>AF158371-1|AAD48781.1|  631|Drosophila melanogaster activator
           protein 4 protein.
          Length = 631

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +1

Query: 145 GSDGAFVTR*-IQGSIKMMNQEIMCEVEIGTHGAIEID---GDDQVQVGVKYEEIETGQY 312
           GS GA++ R  I+ +   +  E + E+  GT   +EID   G  QV V    EE+E    
Sbjct: 302 GSSGAYIPREVIEHTDNFVRSEDLEELG-GTVSYVEIDEMTGQQQVVVCSSIEELEADAA 360

Query: 313 EEYITDDQ-YEEVEAASH 363
            E IT+DQ +EEV  +S+
Sbjct: 361 AEIITEDQVHEEVILSSN 378


>AE014134-2685|AAF53510.1|  631|Drosophila melanogaster CG7664-PA
           protein.
          Length = 631

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +1

Query: 145 GSDGAFVTR*-IQGSIKMMNQEIMCEVEIGTHGAIEID---GDDQVQVGVKYEEIETGQY 312
           GS GA++ R  I+ +   +  E + E+  GT   +EID   G  QV V    EE+E    
Sbjct: 302 GSSGAYIPREVIEHTDNFVRSEDLEELG-GTVSYVEIDEMTGQQQVVVCSSIEELEADAA 360

Query: 313 EEYITDDQ-YEEVEAASH 363
            E IT+DQ +EEV  +S+
Sbjct: 361 AEIITEDQVHEEVILSSN 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,155,173
Number of Sequences: 53049
Number of extensions: 467020
Number of successful extensions: 1288
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)