Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1834
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase prote...    29   3.3  
AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase pro...    29   3.3  
Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase protein
           2 protein.
          Length = 585

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 7/32 (21%), Positives = 23/32 (71%)
 Frame = +2

Query: 53  NFFSVKTVVSIAVITALKNLVPTRLYIIVSWG 148
           +FF++K +++  ++T +K ++   +Y++ ++G
Sbjct: 149 SFFTIKGLIASGMLTTVKGMIENMIYLVETYG 180


>AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase
           protein.
          Length = 585

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 7/32 (21%), Positives = 23/32 (71%)
 Frame = +2

Query: 53  NFFSVKTVVSIAVITALKNLVPTRLYIIVSWG 148
           +FF++K +++  ++T +K ++   +Y++ ++G
Sbjct: 149 SFFTIKGLIASGMLTTVKGMIENMIYLVETYG 180


>Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical
           protein F20D1.2 protein.
          Length = 641

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 403 NLFTPNFFQMLHPNDLLLQPLHIDHQLYIPHTGPFLFLH 287
           +++T N+F  L  + +  +  H   +LYI    PFL  H
Sbjct: 178 SMYTKNWFATLFSSSMSTESCHELWKLYIEQGDPFLVFH 216


>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
           protein ZK455.7 protein.
          Length = 1268

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 223 EIGTHGAIEIDGDDQVQVG-VKYEEIETGQYEEYITDDQYEEVEAASHWDAAS 378
           E GTH  + I  DD +    VK +EIE  + +  + D++ E+   + H D+ +
Sbjct: 592 ERGTHDEL-ISKDDGIYASMVKAQEIERAKEDTTLDDEEDEKTHRSFHRDSVT 643


>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
           protein ZK455.7 protein.
          Length = 1268

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 223 EIGTHGAIEIDGDDQVQVG-VKYEEIETGQYEEYITDDQYEEVEAASHWDAAS 378
           E GTH  + I  DD +    VK +EIE  + +  + D++ E+   + H D+ +
Sbjct: 592 ERGTHDEL-ISKDDGIYASMVKAQEIERAKEDTTLDDEEDEKTHRSFHRDSVT 643


>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical protein
            F33H1.4 protein.
          Length = 1385

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 253  DGD-DQVQVGVKYEEIETGQYEEYITDDQYEEVEA 354
            DG+ + +Q G +Y+EIE  +   Y+T+D+  E +A
Sbjct: 1332 DGNYEMIQEG-EYQEIEEDRTVRYLTEDEIREAQA 1365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,579,983
Number of Sequences: 27780
Number of extensions: 245910
Number of successful extensions: 748
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)