Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1832
(631 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 71 1e-12
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 37 0.015
12_01_1009 - 10253409-10255033,10255301-10255610,10255707-102563... 36 0.027
06_01_0585 - 4200230-4201282 35 0.061
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 35 0.061
08_01_0099 + 709377-709493,710055-710099,710482-710553,712413-71... 33 0.19
10_08_0843 - 20960249-20960446,20960583-20960987,20961092-209612... 32 0.43
03_05_0549 - 25444234-25446792 31 0.75
12_01_1010 - 10280424-10282003,10283359-10283668,10283749-102839... 31 1.00
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 29 3.0
05_05_0214 + 23319507-23321540 29 3.0
04_03_0572 + 17310729-17310746,17312209-17312902,17312991-173134... 29 3.0
03_05_0075 - 20525996-20526073,20527084-20527170,20527700-205278... 29 3.0
12_01_0389 + 3067808-3069121 29 4.0
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 29 4.0
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 28 5.3
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 28 5.3
03_05_0081 - 20577619-20577632,20577760-20577998,20578817-205788... 28 5.3
01_06_1183 - 35176780-35177266,35179631-35181093 28 5.3
01_01_0507 - 3704314-3704449,3705038-3705094,3705219-3705297,370... 28 5.3
03_05_0082 - 20595935-20596039,20596103-20596189,20596468-205965... 28 7.0
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 27 9.3
07_03_0810 - 21674710-21674960,21675318-21675405,21675739-216759... 27 9.3
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 27 9.3
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 27 9.3
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3
Query: 18 AVYTYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAIL 197
A +TY EK+K GYGTQ ER+GKDSIK FD C L L+P +P+ +G+ F KE IL
Sbjct: 1155 AFFTYEEKRK----LGYGTQRERLGKDSIKPFDACCLCLKPLIHPLCCPKGHTFCKECIL 1210
Query: 198 EYIISKKNAYNR 233
E ++++K R
Sbjct: 1211 ECLLAQKKDIKR 1222
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 426 KQLPSFWVPSQLPDAKISKIEKPDPTVYCPISGKPLKMKDLIEVKWTLVN 575
+ + +FW+PS P+A +K+E P CP + LK+K L + +T N
Sbjct: 1367 RNMKAFWLPSATPEAT-AKVEAPSTDTICPEGQEKLKLKSLFPISFTEEN 1415
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 111 FDCCSLTLQPCRNPVVTKEGYLFDKEAILEYI 206
F CC+LT P +PV T +G +FD +I+ YI
Sbjct: 39 FYCCALTFLPFEDPVCTADGSVFDLMSIIPYI 70
>12_01_1009 -
10253409-10255033,10255301-10255610,10255707-10256312,
10256359-10256487
Length = 889
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 69 GTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEY 203
G + E +D + + C +T++ R+PVV + G+ F++EAI +
Sbjct: 78 GEEGEEEEEDGVLSAFLCPITMEVMRDPVVVETGHAFEREAIARW 122
>06_01_0585 - 4200230-4201282
Length = 350
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 102 IKNFDCCSLTLQPCRNPVVT-KEGYLFDKEAILEYIISKK 218
+ F CC+L+ +P P V + G LF+KEA++E ++ K+
Sbjct: 118 LSRFTCCALSGEPLAAPAVADRLGNLFNKEALVEALLHKR 157
>05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 34.7 bits (76), Expect = 0.061
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 102 IKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKN 221
+ ++ CC +T + R+PV+T G +++ ILE++ N
Sbjct: 1323 VPDYLCCQITFEIFRDPVITPSGITYERSIILEHLCKVGN 1362
>08_01_0099 +
709377-709493,710055-710099,710482-710553,712413-712484,
712763-712839,713040-713169,713250-713360,713443-713568
Length = 249
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 117 CCSLTLQPCRNPVVTKEGYLFDKEAILEYI 206
CC +TL R+PV+T G +++ IL+++
Sbjct: 177 CCKITLDIFRDPVITPSGITYERAVILDHL 206
>10_08_0843 -
20960249-20960446,20960583-20960987,20961092-20961232,
20961324-20961471,20961742-20961863,20962372-20962412,
20962671-20962839
Length = 407
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 27 TYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEY 203
T ++ A S T + KDSI + C ++ + R P + +G+ ++ EAI+ +
Sbjct: 307 TLLHRRSLTAFSPASTVPSQFDKDSIPSHFICPISQEIMREPCIAADGFTYEAEAIINW 365
>03_05_0549 - 25444234-25446792
Length = 852
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEY 203
C LT Q R+PV + G F++EAIL++
Sbjct: 20 CPLTKQVMRDPVTIETGQTFEREAILKW 47
>12_01_1010 -
10280424-10282003,10283359-10283668,10283749-10283939,
10283967-10284279
Length = 797
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYNRLL 239
C L+ Q R+PV + G F++EAIL++ + RL+
Sbjct: 27 CPLSKQVMRDPVTIESGATFEREAILKWFKDNGSGGRRLV 66
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -1
Query: 556 TSIKSFIFNGLPLIGQ*TVGSGFSIFEIFASGSWDGT-QKLGNCFSLPFAIFDTEFIVFS 380
T IK + L L + + F + +F G+ D +PF+ + + S
Sbjct: 311 TQIKPIVRTSLFLCSSVYIATSFFAYLLFGEGTLDDVLANFDANLGIPFSSVFDDIVRVS 370
Query: 379 SIAEVLGVVDEIFFSLFMNL 320
A V+ V +FF+L +NL
Sbjct: 371 YAAHVMLVFPIVFFALRLNL 390
>05_05_0214 + 23319507-23321540
Length = 677
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKN 221
C ++L R+PVV+ G +D+E+I + S K+
Sbjct: 281 CPISLDLMRDPVVSASGQTYDRESITRWFGSGKS 314
>04_03_0572 +
17310729-17310746,17312209-17312902,17312991-17313400,
17325755-17326063
Length = 476
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 66 YGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYIISK 215
Y T +VG DS K C + P R P +T +G + + +L + S+
Sbjct: 143 YHTIPFKVGTDSAKALRCRRRAIAPNRKPKITVDGAMEARFVLLRKVCSR 192
>03_05_0075 -
20525996-20526073,20527084-20527170,20527700-20527818,
20527983-20528221,20528324-20528380,20528506-20529131
Length = 401
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 439 VFGYHPNFPMQRFRK*KNLIQPFTVRSAA 525
+F Y NFP+Q+F + ++++ P SAA
Sbjct: 74 IFAYAANFPIQKFLQAQSIVAPSAYTSAA 102
>12_01_0389 + 3067808-3069121
Length = 437
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYI 206
C ++LQP ++PV + G +D+ AI ++
Sbjct: 11 CPISLQPMQDPVTSPTGISYDRRAIHRWL 39
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 141 CRNPVVTKEGYLFDKEAILEYIISKKNAYNRLLK 242
CR+ +V + ++ A L+Y+++KK+A RLL+
Sbjct: 535 CRSYLVGAKVIIYTNHAALKYLLTKKDAKPRLLR 568
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 318 IKFMNREKNISSTTPSTSAIEEKTINSVSNIAN 416
+K + R K I ++ PS +EEK ++ V +AN
Sbjct: 263 LKLLPRSKPIEASEPSPVYVEEKQVHQVPVVAN 295
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEY 203
C LT + +PV T+ G +D++AI EY
Sbjct: 169 CPLTNKVMVDPVTTESGVTYDRKAIEEY 196
>03_05_0081 -
20577619-20577632,20577760-20577998,20578817-20578873,
20579001-20579632,20582728-20583105
Length = 439
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 439 VFGYHPNFPMQRFRK*KNLIQPFTVRSAA 525
+F Y NFP+Q+F + ++++ P SAA
Sbjct: 202 IFAYAANFPIQKFLQAQSIVAPSAYISAA 230
>01_06_1183 - 35176780-35177266,35179631-35181093
Length = 649
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKN 221
C ++L R+PVV G +D+E+I + S K+
Sbjct: 280 CPISLDLMRDPVVVASGQTYDRESIDRWFSSGKS 313
>01_01_0507 -
3704314-3704449,3705038-3705094,3705219-3705297,
3705380-3705486,3705833-3705949,3706077-3706165,
3706668-3706721,3706800-3706866,3706971-3707128,
3707318-3707386,3707481-3707618,3707706-3707740,
3707829-3707952
Length = 409
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 427 FSLPFAIFDTEFIVFSSIAEVLGVVDE 347
+SLPF ++ T F F A++ G+V+E
Sbjct: 349 YSLPFLLWKTRFPTFVRQAQISGIVEE 375
>03_05_0082 -
20595935-20596039,20596103-20596189,20596468-20596586,
20596686-20596924,20597044-20597100,20597203-20597909,
20599827-20600192
Length = 559
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 439 VFGYHPNFPMQRFRK*KNLIQPFTVRSAA 525
+F Y NFP+Q+F + ++++ P SAA
Sbjct: 223 IFAYAANFPIQKFMQAQSIMAPSAYISAA 251
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 381 EKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIEKPDPTVYCP-ISGKPLKMKDL-IE 554
E IN SN + + + +VP+ P+ K+ K + PT+ +S LK+ +L +
Sbjct: 320 EVKINIPSNSQSSSSQSVSPMFVPTIDPNIKLGKQKAFGPTISEELVSELALKLNNLKVN 379
Query: 555 VKWTLVNDPDDKEVFNSQRKPGT 623
++D + ++ N KP T
Sbjct: 380 KNINEISDNEKYDMVNKIFKPST 402
>07_03_0810 -
21674710-21674960,21675318-21675405,21675739-21675990,
21676521-21676685,21677358-21678494
Length = 630
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 433 NCFSLPFAIFDTEFIVFSSIAEVLG-VVDEI 344
N S+PF + + E +V + E LG VVDE+
Sbjct: 160 NASSVPFELLNDEMVVVEQLVEELGVVVDEM 190
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -1
Query: 556 TSIKSFIFNGLPLIGQ*TVGSGFSIFEIFASGSW-DGTQKLGNCFSLPFAIFDTEFIVFS 380
T K + L L + + F + +F G+ D + +PF+ + + S
Sbjct: 271 TQTKPIVQTSLALCSSVYIATSFFAYLLFGEGTLADVLANFDSNLHIPFSSVFNDVVRVS 330
Query: 379 SIAEVLGVVDEIFFSLFMNL 320
+ ++ V +FF+L +NL
Sbjct: 331 YVVHIMLVFPIVFFALRLNL 350
>01_04_0008 +
15041682-15041909,15042035-15042319,15042406-15042723,
15044087-15044128,15045111-15045391,15045808-15045883,
15046196-15046296,15047971-15048088,15048872-15049186
Length = 587
Score = 27.5 bits (58), Expect = 9.3
Identities = 22/97 (22%), Positives = 41/97 (42%)
Frame = +3
Query: 336 EKNISSTTPSTSAIEEKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIEKPDPTVYCP 515
E+ I + S AIE + ++ + + ++ +W S+LP A I K ++P
Sbjct: 277 EEKIKESCQSMIAIEVEQLHKIFKLCGSPSEE---YWKKSKLPHATIFKPQQPYKRCIRE 333
Query: 516 ISGKPLKMKDLIEVKWTLVNDPDDKEVFNSQRKPGTC 626
+ K L V+ L DP +++ S + C
Sbjct: 334 -AFKDFPPSSLPLVETLLAIDPAERQTATSALQSEVC 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,286,176
Number of Sequences: 37544
Number of extensions: 285098
Number of successful extensions: 737
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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