Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1832
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2707|AAF48829.1|  307|Drosophila melanogaster CG6179-PA...   239   2e-63
BT001734-1|AAN71489.1|  698|Drosophila melanogaster RE71585p pro...    29   6.9  
AY075524-1|AAL68331.1|  698|Drosophila melanogaster RE71517p pro...    29   6.9  
AE014296-1687|AAF50246.2|  698|Drosophila melanogaster CG32048-P...    29   6.9  

>AE014298-2707|AAF48829.1|  307|Drosophila melanogaster CG6179-PA
           protein.
          Length = 307

 Score =  239 bits (585), Expect = 2e-63
 Identities = 113/211 (53%), Positives = 152/211 (72%), Gaps = 15/211 (7%)
 Frame = +3

Query: 3   NCTAGAVYTYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFD 182
           NCTAGAVYTY+EKK+DAA SGYGT ++R+GKDS+K+FDCCSLTLQPCR PV+TK+GYLFD
Sbjct: 7   NCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRPVITKDGYLFD 66

Query: 183 KEAILEYIISKKNAYNRLLKKYEKQLKKDXXXXXXXXXXXXXXXXIKFMNREK------- 341
           KEAIL+YI++KKN Y+R LK+YE+  + +                 +F+N EK       
Sbjct: 67  KEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLSQEANSKQQARMERFVNAEKPAMTPAH 126

Query: 342 --NISSTTPSTSAI------EEKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIEKPD 497
               +S  PSTS+       E  + +S+SN+ NG EK+LPSFW+PS+ P+A ++K +KPD
Sbjct: 127 SSAAASEKPSTSSAAAAASSESSSASSISNMTNGHEKKLPSFWLPSECPNAGLAKAQKPD 186

Query: 498 PTVYCPISGKPLKMKDLIEVKWTLVNDPDDK 590
            T+YCP+S KPL++KDLI+VK+TL+ D D K
Sbjct: 187 ATIYCPVSQKPLRVKDLIDVKFTLLKDGDTK 217


>BT001734-1|AAN71489.1|  698|Drosophila melanogaster RE71585p
           protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +3

Query: 465 DAKISKIEKPDPTVYCPISGKPLKMKDLIEVKWTLVNDPDDKEVFN 602
           + K+  ++K   T++  ++G  + +K     K    NDP+D E+ N
Sbjct: 60  ECKVQNLKKRKVTIHISVNGVRVVLKKRRRKKKNWTNDPEDIELLN 105


>AY075524-1|AAL68331.1|  698|Drosophila melanogaster RE71517p
           protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +3

Query: 465 DAKISKIEKPDPTVYCPISGKPLKMKDLIEVKWTLVNDPDDKEVFN 602
           + K+  ++K   T++  ++G  + +K     K    NDP+D E+ N
Sbjct: 60  ECKVQNLKKRKVTIHISVNGVRVVLKKRRRKKKNWTNDPEDIELLN 105


>AE014296-1687|AAF50246.2|  698|Drosophila melanogaster CG32048-PA,
           isoform A protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +3

Query: 465 DAKISKIEKPDPTVYCPISGKPLKMKDLIEVKWTLVNDPDDKEVFN 602
           + K+  ++K   T++  ++G  + +K     K    NDP+D E+ N
Sbjct: 60  ECKVQNLKKRKVTIHISVNGVRVVLKKRRRKKKNWTNDPEDIELLN 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,704,493
Number of Sequences: 53049
Number of extensions: 491909
Number of successful extensions: 1158
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)