Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1832
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical pr... 130 6e-31
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 33 0.17
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 33 0.17
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 33 0.17
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 31 0.51
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.51
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 31 0.90
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 31 0.90
Z50874-5|CAA90764.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 29 2.1
Z70756-5|CAA94791.2| 290|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 4.8
L14745-15|AAA27917.1| 85|Caenorhabditis elegans Hypothetical p... 28 4.8
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 28 4.8
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 28 4.8
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 28 6.3
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 28 6.3
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical
protein R05G6.4 protein.
Length = 310
Score = 130 bits (315), Expect = 6e-31
Identities = 56/89 (62%), Positives = 73/89 (82%)
Frame = +3
Query: 3 NCTAGAVYTYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFD 182
N TA +VYTYHE+++DA ASGYGT R+G DSIK F CCSLTLQPCRNPV++ GY+FD
Sbjct: 7 NSTAASVYTYHERRRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISPTGYIFD 66
Query: 183 KEAILEYIISKKNAYNRLLKKYEKQLKKD 269
+EAILE I+++K AY + LK+YEKQ+ ++
Sbjct: 67 REAILENILAQKKAYAKKLKEYEKQVAEE 95
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +3
Query: 327 MNREKNISSTTPSTSAIEEKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIEKPDPTV 506
+ R+ + ST + +SN+ K LPSFW+P P A +K+EKP V
Sbjct: 138 LKRQGGVMSTEIAAKVKAHGEEGVMSNMKGDKSTSLPSFWIPELNPTAVATKLEKPSSKV 197
Query: 507 YCPISGKPLKMKDLIEVKWT 566
CP+SGKP+K+K+L+EVK+T
Sbjct: 198 LCPVSGKPIKLKELLEVKFT 217
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYN 230
CSL+L P +PV + G +FD AI+ Y+ KK+ N
Sbjct: 45 CSLSLLPFEDPVCARSGEIFDLTAIVPYL--KKHGKN 79
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYN 230
CSL+L P +PV + G +FD AI+ Y+ KK+ N
Sbjct: 45 CSLSLLPFEDPVCARSGEIFDLTAIVPYL--KKHGKN 79
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYN 230
CSL+L P +PV + G +FD AI+ Y+ KK+ N
Sbjct: 45 CSLSLLPFEDPVCARSGEIFDLTAIVPYL--KKHGKN 79
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 120 CSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYN 230
CSL+L P +PV + G +FD AI+ Y+ KK+ N
Sbjct: 45 CSLSLLPFEDPVCARSGEIFDLTAIVPYL--KKHGKN 79
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 339 KNISSTTPSTSAIEEKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIEKPDPTVYCPI 518
KNI S S EE N +S++ KE+Q P P + K+ + Y
Sbjct: 727 KNIDVEVLSNSEYEEYKKNCLSSVIPSKERQEPGGGAPMNCSTVNVDKLSDKEYKEYKKK 786
Query: 519 SGKPLKMKDLIEVKW-TLVNDPDDKEVFNSQRKP 617
GK ++ + +V +L + ++ + N ++KP
Sbjct: 787 CGKKIRSEVCDDVNVDSLSVEQYNEYLRNCEKKP 820
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = +3
Query: 321 KFMNREK--NISSTTPSTSAIEEKTINSVSNIANGKEKQLPSFWVPSQ------LPDAKI 476
KF+NR K N+ + +S I+EKT + SN++ EK + + SQ + +
Sbjct: 785 KFINRWKKANVIILSEDSSEIDEKTKAADSNVSEIAEKLEETLKISSQKNIDVAVTSMPV 844
Query: 477 SKIEKPDPTVYCPISGKPLKMKDLIEVKWTLVNDPDD 587
S KP+P + P+K+K++ + + L+ P +
Sbjct: 845 STEIKPEPITKLS-NEAPVKIKNVAQPQCDLIEAPQE 880
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 42 KKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYI 206
KK TQ +R ++ + C +TL+ + PV+ G +D+E I++++
Sbjct: 166 KKRLTELTLATQEKRQNRE-VPEMLCGKITLELMKEPVIVPSGITYDREEIVQHL 219
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 42 KKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYI 206
KK TQ +R ++ + C +TL+ + PV+ G +D+E I++++
Sbjct: 166 KKRLTELTLATQEKRQNRE-VPEMLCGKITLELMKEPVIVPSGITYDREEIVQHL 219
>Z50874-5|CAA90764.1| 305|Caenorhabditis elegans Hypothetical
protein R10E4.3 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Frame = +3
Query: 159 TKEGYLFDKEAILEYIISKKNAYNRLLKKYEKQLKKDXXXXXXXXXXXXXXXXIKFMNR- 335
T E + D+ A +EY++ K + KK +K+ K+ I ++R
Sbjct: 149 TMEQFDNDETAGIEYLVPLKRSKEEKEKK-KKRKTKERMDALDELTRVTSNDRIPLLSRI 207
Query: 336 ----EKNISSTTPSTSAIEEKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIE 488
+ + + P+TS I E+T+ + S + + K QL PS P K S +E
Sbjct: 208 VHHNQPSRKTLKPATSTIRERTLETQSTMEDDK-TQLKVIRKPSSRPHKKPSTME 261
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 439 LGNCFSLPFAIFDTEFIVFSSIAEVLGVVDEIFF 338
LG F++ F ++ FI+ + I +LGVV ++F
Sbjct: 842 LGYTFNVTFQTYELTFIISTVIMSILGVVRSVWF 875
>Z70756-5|CAA94791.2| 290|Caenorhabditis elegans Hypothetical
protein T06E4.5 protein.
Length = 290
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 333 REKNISSTTPSTSAIEEKTIN-SVSNIANGKEKQLPSFWVPSQL--PDAKISKIEKPDPT 503
++ +TT S + I++ + V+ + + +LP+ S L P +++SK+EK +
Sbjct: 223 KKPKTKATTSSNNEIKKNVLKMDVTKDKDLESSKLPTESKRSSLQSPQSELSKVEKAQAS 282
Query: 504 VYCPISGK 527
+ C IS K
Sbjct: 283 INCSISKK 290
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 101 GVFSDTFTLSTVARSSSVLFLFMICIHSTC 12
G+ D+F S ++SS++ L +C H TC
Sbjct: 106 GLPQDSFRCSVCSKSSTIGVLPFVCAHKTC 135
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 101 GVFSDTFTLSTVARSSSVLFLFMICIHSTC 12
G+ D+F S ++SS++ L +C H TC
Sbjct: 106 GLPQDSFRCSVCSKSSTIGVLPFVCAHKTC 135
>L14745-15|AAA27917.1| 85|Caenorhabditis elegans Hypothetical
protein C02F5.2 protein.
Length = 85
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 489 KPDPTVYCPISGKPLKMKDLIEVKWTLVNDPDDKEVFNSQRKP 617
K D ++ P S +++ E +W +DP E+ N ++KP
Sbjct: 12 KSDTSISLPPSSTGEALQNYTESEWNASDDPYSAELLNVKKKP 54
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 101 GVFSDTFTLSTVARSSSVLFLFMICIHSTC 12
G+ D+F S ++SS++ L +C H TC
Sbjct: 106 GLPQDSFRCSVCSKSSTIGVLPFVCAHKTC 135
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 101 GVFSDTFTLSTVARSSSVLFLFMICIHSTC 12
G+ D+F S ++SS++ L +C H TC
Sbjct: 106 GLPQDSFRCSVCSKSSTIGVLPFVCAHKTC 135
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 153 VVTKEGYLFDKEAILEYIISKKNAYNRLLKKYEKQLKK 266
+ T+ YLF +LEY++ KK NR Y K LK+
Sbjct: 505 IQTEMQYLFVHRCVLEYLVQKKYNVNR--DDYTKFLKE 540
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 474 ISKIEKPDPTVYCPISGKPLKMKDLIEVKW 563
I +++PDPTVY IS L +E W
Sbjct: 418 IEALKEPDPTVYMQISNALLHRSTSLEFLW 447
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -3
Query: 95 FSDTFTLSTVARSSSVLFLFMICIH 21
FS TF+ +++++S+ + F+F +CIH
Sbjct: 11 FSRTFSTNSISKSAKIPFVF-VCIH 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,859,298
Number of Sequences: 27780
Number of extensions: 276263
Number of successful extensions: 886
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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