Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1832
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   5.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   9.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.9  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 20/83 (24%), Positives = 34/83 (40%)
 Frame = +3

Query: 180 DKEAILEYIISKKNAYNRLLKKYEKQLKKDXXXXXXXXXXXXXXXXIKFMNREKNISSTT 359
           +KE  LE   S K  Y+R  ++ +K  K +                     RE+  S  +
Sbjct: 258 EKEKFLEERTSHKR-YSRSREREQKSYKNEREYRKYRETSKERFRD----RRERERSKES 312

Query: 360 PSTSAIEEKTINSVSNIANGKEK 428
              S++  KTI++ +N  N  +K
Sbjct: 313 KIISSLSNKTIHNNNNYKNYNKK 335


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 444 WVPSQLPDAKISKIE 488
           W+ SQ PDA+   IE
Sbjct: 391 WIVSQTPDAEYCVIE 405


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 629 NTCTGFSLAIKDFFIIWIIHQC 564
           +T +  S A+K   +IW++  C
Sbjct: 163 HTMSKLSRAVKFIIVIWLLALC 184


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 344 IFFPVHEFNEFRFFFSHRK 288
           I FPV  F    FFF H K
Sbjct: 468 ITFPVAYFMFLTFFFIHYK 486


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 344 IFFPVHEFNEFRFFFSHRK 288
           I FPV  F    FFF H K
Sbjct: 454 ITFPVAYFMFLTFFFIHYK 472


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 344 IFFPVHEFNEFRFFFSHRK 288
           I FPV  F    FFF H K
Sbjct: 488 ITFPVAYFMFLTFFFIHYK 506


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 344 IFFPVHEFNEFRFFFSHRK 288
           I FPV  F    FFF H K
Sbjct: 437 ITFPVAYFMFLTFFFIHYK 455


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 510  CPISGKPLKMKDLIEVKWTLVND 578
            CPI    ++ + + E  WTLV++
Sbjct: 1527 CPILYFTIQYRPINEFHWTLVSN 1549


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 510  CPISGKPLKMKDLIEVKWTLVND 578
            CPI    ++ + + E  WTLV++
Sbjct: 1523 CPILYFTIQYRPINEFHWTLVSN 1545


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,470
Number of Sequences: 438
Number of extensions: 3246
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)