Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1831
         (601 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA...    44   0.003
UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA...    38   0.18 
UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p...    34   2.2  
UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C oxidoreductase-s...    34   2.2  
UniRef50_Q5CRR2 Cluster: Putative uncharacterized protein; n=2; ...    33   3.9  

>UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG14482-PA
           - Tribolium castaneum
          Length = 63

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 29  VGKKHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 172
           +GKKH+EI                    Y TDWK+ +  +PYYNGKFK
Sbjct: 14  IGKKHIEIASQWIGSAVAFGATAGVGITYATDWKLILQYMPYYNGKFK 61


>UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14482-PA - Apis mellifera
          Length = 51

 Score = 37.9 bits (84), Expect = 0.18
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 23  VRVGKKHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 172
           +++GK+H EI                    + TDWKV    IP+Y  KFK
Sbjct: 1   MKIGKRHFEIATKWIPSLMVYTGAAGLAMVFVTDWKVIAGYIPFYGNKFK 50


>UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p -
           Drosophila melanogaster (Fruit fly)
          Length = 57

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +2

Query: 32  GKKHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 172
           GKKH EI                    Y+TDWK+ +  +P Y  KF+
Sbjct: 8   GKKHAEIASSFIRSGAGFGGAAGLAVLYYTDWKLVLQYVPIYGSKFE 54


>UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative; n=1;
           Aedes aegypti|Rep: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 54

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 113 YFTDWKVFVANIPYYNGKF 169
           Y TDW+V V  IP+Y GKF
Sbjct: 33  YLTDWRVIVTYIPFYGGKF 51


>UniRef50_Q5CRR2 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 710

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 132 TFQSVKYRSVTKAAPPNPPAEDRNAVA-ISKCFLPTRTIFNSSW 4
           TF + K  S+    P N P  + N V+ IS C L    IFNS+W
Sbjct: 392 TFGNNKETSIKTPPPSNFPTNNSNCVSNISTCDLSYNAIFNSNW 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,451,810
Number of Sequences: 1657284
Number of extensions: 9763547
Number of successful extensions: 17545
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17541
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)