Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1827
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8EWV9 Cluster: Putative uncharacterized protein MYPE90...    35   2.2  
UniRef50_Q86AL1 Cluster: Similar to Dictyostelium discoideum (Sl...    34   3.8  
UniRef50_Q62499 Cluster: Unknown protein; n=1; Mus musculus|Rep:...    33   6.6  

>UniRef50_Q8EWV9 Cluster: Putative uncharacterized protein MYPE900;
           n=1; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE900 - Mycoplasma penetrans
          Length = 574

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
 Frame = +1

Query: 238 QDYKQFITVYYLERSQGLSHSLIRLKFFSPDF---DSRIYSFF---IPSLQQTYSVLFCV 399
           Q+YK+   VYY     G+  SL+    F P F      + SFF    PS     ++LFC 
Sbjct: 401 QNYKRVKVVYYYGIITGVVFSLLINAVFWPIFLFGGPSVTSFFNANTPSEIHVLTLLFCT 460

Query: 400 IIYLF--LSQTKADMNCTDSLDKFFFKLVSTI 489
           +++ F  LS + + ++   S  K F  +V+++
Sbjct: 461 LLFQFPLLSLSISGLSLFQSTGKMFLNIVASL 492


>UniRef50_Q86AL1 Cluster: Similar to Dictyostelium discoideum (Slime
           mold). Adenylyl cyclase; n=2; Dictyostelium
           discoideum|Rep: Similar to Dictyostelium discoideum
           (Slime mold). Adenylyl cyclase - Dictyostelium
           discoideum (Slime mold)
          Length = 1400

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 301 LIRLKFFSPDFDSRIYSFFIPSLQQTYSVLFCVIIYLFLSQTKADMNC 444
           L+  K+FS  F SR   F +P+L  T S L  ++I+ F+S    DMNC
Sbjct: 519 LLLSKYFSILFKSR--KFTVPTL--TRSTLIPILIFAFISNISYDMNC 562


>UniRef50_Q62499 Cluster: Unknown protein; n=1; Mus musculus|Rep:
           Unknown protein - Mus musculus (Mouse)
          Length = 87

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 315 VFFTRL*FKNIFFLHPFTTADLFCFILCYYL 407
           +  TR  FK++ FL P++  ++F F LC Y+
Sbjct: 45  IILTRTTFKSLVFLSPYSIFEVFLFFLCKYM 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,864,319
Number of Sequences: 1657284
Number of extensions: 12209952
Number of successful extensions: 25177
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25163
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)