Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1821
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 46 2e-05
03_02_0484 + 8805053-8805538 46 3e-05
03_02_0478 + 8775892-8776377 46 4e-05
03_02_0485 - 8808139-8808618 44 8e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 44 8e-05
01_01_0231 + 1951047-1951499 44 1e-04
01_01_0229 - 1943473-1943922 43 2e-04
01_01_0227 + 1933247-1933699 40 0.001
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 37 0.013
02_01_0222 + 1450233-1450766 36 0.030
06_01_1017 - 7951985-7952425 32 0.48
02_02_0077 - 6586638-6587165 32 0.48
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 31 1.1
09_02_0036 + 3217163-3217584,3217752-3218322 30 1.5
03_05_0543 - 25404630-25405408,25405461-25405605 30 1.5
11_02_0041 - 7669692-7670312 30 1.9
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 30 1.9
02_01_0760 - 5639315-5639685,5640072-5640360 30 1.9
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 29 4.5
11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720... 29 4.5
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 29 4.5
05_07_0296 - 29061900-29061923,29062026-29062440,29062529-290625... 29 4.5
>03_02_0483 - 8804021-8804485
Length = 154
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 219
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
+++ + +GVLTV P+ + +++ IT
Sbjct: 123 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIT 153
>03_02_0484 + 8805053-8805538
Length = 161
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 219
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
+++ + +GVLTV P+ + +++ +T
Sbjct: 130 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQVT 160
>03_02_0478 + 8775892-8776377
Length = 161
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 219
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
+++ + +GVLTV P+ A + +++ I+
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSIQIS 160
>03_02_0485 - 8808139-8808618
Length = 159
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 219
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
+++ + +GVLTV P+ + +++ I+
Sbjct: 128 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIS 158
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPD 219
D+ EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
V++ L +GVLTV P+ +A+ I+
Sbjct: 119 QVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0231 + 1951047-1951499
Length = 150
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPD 219
D+ EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
V++ + +GVLTV P+ +A+ I+
Sbjct: 119 QVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +1
Query: 64 DVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPD 219
D+ EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 220 TVESWLSSDGVLTVIAPRTPAATKNERAVPIT 315
V++ + +GVLTV P+ +A+ I+
Sbjct: 118 QVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148
>01_01_0227 + 1933247-1933699
Length = 150
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 124 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESWLSSDGVLTVIAPRTPAATKNERA 303
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 304 VPIT 315
+PI+
Sbjct: 146 IPIS 149
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Frame = +1
Query: 28 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE------HGYISRQ---- 177
+ + + ++ D+ S EE+ V D +++ G+H++ + E G+ +
Sbjct: 137 VMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSS 196
Query: 178 FTRRYALPENCNPDTVESWLSSDGVLTVIAPRTPAATK 291
+ R ALP+ C+ V + L +GVL V P+T K
Sbjct: 197 YDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233
>02_01_0222 + 1450233-1450766
Length = 177
Score = 35.9 bits (79), Expect = 0.030
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +1
Query: 85 EEISVKTADGYVI-VEGKHEERQDEHGY-------ISRQFTRRYALPENCNPDTVESWLS 240
EE+ V+ + V+ + G+ +E G S +F R LP N N D V + L
Sbjct: 93 EEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALD 152
Query: 241 SDGVLTVIAPRTPAATKNERAVPIT 315
+ GVLT+ P+ + R +PIT
Sbjct: 153 N-GVLTITIPKDNDRKPHARIIPIT 176
>06_01_1017 - 7951985-7952425
Length = 146
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 91 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESWLSSDGVLT 258
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 259 VIAPRTPAATKNERAVPI 312
V+ P+ PA + R PI
Sbjct: 124 VVVPKEPAPAR-PRTRPI 140
>02_02_0077 - 6586638-6587165
Length = 175
Score = 31.9 bits (69), Expect = 0.48
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Frame = +1
Query: 61 LDVQHFSPEEISVKTADGYVIVEGKHEERQ----DEHG----YISRQ-----FTRRYALP 201
+D+ +P ++ V+ DG V+ R D+ G Y+ + F RR+ LP
Sbjct: 66 VDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLP 125
Query: 202 ENCNPDTVESWLSSDGVLTV-IAPRTPAATKNERAVPITQTG 324
E+ + D V + DGVLTV + + P K R V + G
Sbjct: 126 ESADLDGVRAEY-KDGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 363 SFRSGLLNLLPDRAGLSDGNSSLVLRGSRSPGSDHGQHTVRGQPR 229
SFR G+L L +G VL G ++ G HG TV G P+
Sbjct: 700 SFRPGVLTALMGISGAGKTTLLDVLAGRKTSGHIHGNITVSGYPK 744
>09_02_0036 + 3217163-3217584,3217752-3218322
Length = 330
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 583 ITIHWPSFYNVV-TGKTLALPNLIALQH 663
I+ W F N+V +G TL++PN + LQH
Sbjct: 69 ISAGWSRFINLVQSGPTLSIPNYVLLQH 96
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +1
Query: 43 DKFQVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 219
+ ++LD F EEI V + G++ G ER SR F + + LP +CN D
Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVD 94
Query: 220 TVESWLSSDGVLTVIAPRTPA-ATKNERAVPIT--QTGPVRKEIKEPTA 357
+ + ++ + + +TP+ T + P+T P + E + P A
Sbjct: 95 GIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPPQPEPRRPPA 143
>11_02_0041 - 7669692-7670312
Length = 206
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 175 QFTRRYALPENCNPDTVESWLSSDGVLTVIAPRTPAATKNE-RAVPITQTG 324
+F RR+ +P + V + L DGVLTV P+ P E R V I G
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAG 190
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 481 TIKRSVSQARTRNANKINTRYNTFLIHSVP 392
TI++ ++ RTRNAN I TR + FL H+ P
Sbjct: 351 TIRKRLTGDRTRNAN-ITTRDSPFLQHNTP 379
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +1
Query: 10 RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK-----HEER-QDEHG--Y 165
R + + +++++++ +V +++ V DG + + G+ E+R +D G +
Sbjct: 111 RPLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECW 170
Query: 166 ISRQFTRRYALPENCNPDTVESWLSSDGVLTVIAPRTPAATKNERAVPI 312
+ + LPE+ + + + + DGVL V PR+P ++ V +
Sbjct: 171 AAATYHAGLLLPEDAVAEGITAEVR-DGVLHVTVPRSPERKRSVTEVKV 218
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 310 WEQLARSSWQPESWERSRSAHRQRTTKI 227
W +L R W W+ S AHR R K+
Sbjct: 582 WRELIRLKWCNPEWQASSHAHRIRREKM 609
>11_05_0004 -
18269416-18269473,18270319-18270509,18271061-18272004,
18272083-18272254,18272332-18272407,18272498-18272617,
18272795-18272959,18273048-18273138,18273673-18273757,
18273873-18274043,18274151-18274207,18274290-18274385,
18275223-18275365,18275464-18275530
Length = 811
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 199 PENCNPDTVESWLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTAEAESNET 378
PE +P +E +S V + PRT N A+P + ++ + E+E N T
Sbjct: 369 PERVSPWQIEPAVSPPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGT 428
Query: 379 KQ 384
++
Sbjct: 429 QR 430
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 310 WEQLARSSWQPESWERSRSAHRQRTTKI 227
W +L R W W+ S AHR R K+
Sbjct: 170 WRELIRLKWCNPEWQASSHAHRIRREKM 197
>05_07_0296 -
29061900-29061923,29062026-29062440,29062529-29062566,
29062689-29062741,29062851-29063034,29064486-29064669,
29064761-29064916,29064998-29065173,29065277-29065454,
29066015-29066421
Length = 604
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +1
Query: 100 KTADGYVIVEGKHEERQDEHGYISRQFTRRYALPE------NCNPDTVESWLSSDGV-LT 258
+TA GY+ + E R+D H + TR+ + + C P T+++ + G+ +
Sbjct: 343 RTAVGYLDITRLSELRRDAHPSVFTPSTRKRDVKKLVQEHSPCQPSTLQADAYTTGLSMK 402
Query: 259 VIAPRTPAATKNERAVPITQTGPVRKEIKE 348
I R N+ VP T+ + KE KE
Sbjct: 403 EIERRRKIGAANKGKVPWTKGRKLSKEHKE 432
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,166,014
Number of Sequences: 37544
Number of extensions: 287007
Number of successful extensions: 919
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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