Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1821
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   141   2e-35
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    24   3.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.8  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.8  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  141 bits (341), Expect = 2e-35
 Identities = 67/125 (53%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
 Frame = +1

Query: 13  DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 192
           D GS +  +KDKFQ+NLDVQ FSPEEISVK  D  V+VEGKHEE+QD+HGY+SR F RRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 193 ALPENCNPDTVESWLSSDGVLTVIAPRTPAATKN-ERAVPITQTGPVRKEIKEPTAEAES 369
            LP+  N   + S LSSDG+LT+  PR     KN ER++PIT TG   K++    A    
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122

Query: 370 NETKQ 384
           +  K+
Sbjct: 123 HSKKE 127


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 PEGD*GAHCGS*EQRNK 380
           P GD GAHCG+ +  N+
Sbjct: 321 PYGDTGAHCGNHQDLNE 337


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 261  DRSQDSGCHEERASCSHHSNRPGPEGD*GAHCG 359
            + S D G     AS S  ++ P P G  G H G
Sbjct: 1399 NESTDGGESMGTASTSSQTDEPRPGGSGGGHTG 1431


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 14/79 (17%), Positives = 32/79 (40%)
 Frame = +1

Query: 106 ADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESWLSSDGVLTVIAPRTPAA 285
           +DG +  +  H  +   H  +      ++   +  +P T      S  +  +++ R   A
Sbjct: 83  SDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKA 142

Query: 286 TKNERAVPITQTGPVRKEI 342
           T  ++  P  Q+  +R+ I
Sbjct: 143 TAEQQQQPHPQSPAIREPI 161


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 14/79 (17%), Positives = 32/79 (40%)
 Frame = +1

Query: 106 ADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESWLSSDGVLTVIAPRTPAA 285
           +DG +  +  H  +   H  +      ++   +  +P T      S  +  +++ R   A
Sbjct: 83  SDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKA 142

Query: 286 TKNERAVPITQTGPVRKEI 342
           T  ++  P  Q+  +R+ I
Sbjct: 143 TAEQQQQPHPQSPAIREPI 161


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 418 YSVC*FYLHSSCVLVRLIA 474
           +SVC   +H SC  VR IA
Sbjct: 463 HSVCSTEVHRSCFCVRFIA 481


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 418 YSVC*FYLHSSCVLVRLIA 474
           +SVC   +H SC  VR IA
Sbjct: 463 HSVCSTEVHRSCFCVRFIA 481


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,530
Number of Sequences: 2352
Number of extensions: 10552
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)