Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1817
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    31   0.033
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   6.7  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   6.7  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    23   8.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 31.1 bits (67), Expect = 0.033
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 401 CPECDKKFASNVYRRQHYNFYHLRKSPYKCEACNKVS 291
           C  CD  F ++    +H  + H  + P+KC  C+  S
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYAS 221



 Score = 27.1 bits (57), Expect = 0.54
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 407 YPCPECDKKFASNVYRRQHYNFYH 336
           Y C +C + F      ++H N+YH
Sbjct: 383 YKCDQCAQTFRQKQLLKRHMNYYH 406



 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -1

Query: 407 YPCPECDKKFASNVYRRQHYNFYHLRKSPYKCEAC 303
           Y C  C     S  +   H    H  + PYKC+ C
Sbjct: 355 YRCEYCPYASISMRHLESHL-LLHTDQKPYKCDQC 388


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 368 RLRRTSCRTPGRDTWIRTKPLSVIYTN 448
           RLRR +      D+W++ +PL   YT+
Sbjct: 219 RLRRNAAER--HDSWVQKQPLLFTYTD 243


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 305 TLRIYMAIYVNDRSCNAD 358
           TLRIY A+ V +R C  D
Sbjct: 358 TLRIYPALAVLNRECTID 375


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 483 LYLLNRASD*LETWYPCRKYTYLMDR 560
           LYLL  A      WY  RKYT+  DR
Sbjct: 3   LYLLLLAVT-AAIWYVRRKYTFWADR 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,765
Number of Sequences: 2352
Number of extensions: 12999
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)