Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1813
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0085 + 28264399-28266186                                         28   5.6  
07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960...    28   5.6  
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...    28   7.4  
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...    28   7.4  

>11_08_0085 + 28264399-28266186
          Length = 595

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 485 LNHLTIILFDENSGINTRCTNIQCCDHSRDELLNYCVPFS 366
           L+++T +L ++  G +   TN+QC +    E  N  +P S
Sbjct: 51  LSYVTSMLMEDEMGSSAAVTNLQCVNRGSTEEANNMLPGS 90


>07_03_1651 -
           28395369-28395436,28395524-28395575,28395857-28396092,
           28396362-28396419,28396509-28396577,28396686-28396791,
           28397104-28397171,28397266-28397385,28398144-28398231,
           28399433-28399534,28399699-28399757,28399866-28400003,
           28400222-28400473,28400508-28400593,28401061-28401165,
           28402351-28402516
          Length = 590

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 71  LNILIIFYANEFKCILIHYVNLFLYYNKKSSVF 169
           +N+ II     FK +L  Y+N +++Y+K+   F
Sbjct: 97  INVSIIVLVFGFKTVLNGYINNYIHYSKQGQEF 129


>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 274 AILEIGLIRTPTYARLRIHLKGKLD 200
           A+L++GLIRT T  R+   LKG LD
Sbjct: 141 ALLDVGLIRTTTGNRVFGALKGALD 165


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 274 AILEIGLIRTPTYARLRIHLKGKLD 200
           A+L++GLIRT T  R+   LKG LD
Sbjct: 141 ALLDVGLIRTTTGNRVFGALKGALD 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,125,293
Number of Sequences: 37544
Number of extensions: 279645
Number of successful extensions: 557
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)