Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1811
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.5  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   8.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 505 YWSNWLTPATLPKRFNTAFFVTALEEKPELKNY 603
           YW ++       +RF  A+ V  LE K    NY
Sbjct: 342 YWMHFRGLMDCDERFTRAYQVAVLEYKGTQTNY 374


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 169 DDRWLQLFSLFGYTNTDLES 228
           + RW Q+F++ G+ N   E+
Sbjct: 380 EHRWRQIFNMVGFRNAVQET 399


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 169 DDRWLQLFSLFGYTN 213
           + RW Q+F++ G+ N
Sbjct: 379 EHRWRQIFNMVGFRN 393


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 169 DDRWLQLFSLFGYTN 213
           + RW Q+F++ G+ N
Sbjct: 380 EHRWRQIFNMVGFRN 394


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +1

Query: 493  WSLHYWSNWLTPATLPKRFNTAFFVTALEEKPELKNYSTE 612
            WS    S W T  T  +   T    T+   +P   N+ T+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQ 1082


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 255 SNFTKESHSKAHIIKNYSHQG 317
           ++  K SH K HI+++ +  G
Sbjct: 565 NHMVKNSHYKEHIMRSITESG 585


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 252 HSNFTKESHSKAHI 293
           H  FT++ H K H+
Sbjct: 16  HKRFTRDHHLKTHM 29


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 252 HSNFTKESHSKAHI 293
           H  FT++ H K H+
Sbjct: 169 HKRFTRDHHLKTHM 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,292
Number of Sequences: 336
Number of extensions: 3208
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)