Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1810
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36268-1|AAC50684.2|  949|Homo sapiens beta-prime-adaptin protein.     29   7.9  
L13939-1|AAC98702.1|  949|Homo sapiens beta-prime-adaptin protein.     29   7.9  
CT841508-1|CAJ86438.1|  939|Homo sapiens AP1B1 protein.                29   7.9  
BC127110-1|AAI27111.1| 1381|Homo sapiens KIAA1012 protein protein.     29   7.9  
BC127109-1|AAI27110.1| 1381|Homo sapiens KIAA1012 protein protein.     29   7.9  
BC059380-1|AAH59380.1|  666|Homo sapiens KIAA1012 protein protein.     29   7.9  
BC046242-1|AAH46242.1|  919|Homo sapiens AP1B1 protein protein.        29   7.9  
AB023229-1|BAA76856.2| 1452|Homo sapiens KIAA1012 protein protein.     29   7.9  

>U36268-1|AAC50684.2|  949|Homo sapiens beta-prime-adaptin protein.
          Length = 949

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 172 IMISMSHALPKYYLPTVTVCERPTPRNPHENSSI 273
           I+  +++ +PK      ++CER TPR  H NS++
Sbjct: 222 ILDCLANYMPKDDREAQSICERVTPRLSHANSAV 255


>L13939-1|AAC98702.1|  949|Homo sapiens beta-prime-adaptin protein.
          Length = 949

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 172 IMISMSHALPKYYLPTVTVCERPTPRNPHENSSI 273
           I+  +++ +PK      ++CER TPR  H NS++
Sbjct: 222 ILDCLANYMPKDDREAQSICERVTPRLSHANSAV 255


>CT841508-1|CAJ86438.1|  939|Homo sapiens AP1B1 protein.
          Length = 939

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 172 IMISMSHALPKYYLPTVTVCERPTPRNPHENSSI 273
           I+  +++ +PK      ++CER TPR  H NS++
Sbjct: 222 ILDCLANYMPKDDREAQSICERVTPRLSHANSAV 255


>BC127110-1|AAI27111.1| 1381|Homo sapiens KIAA1012 protein protein.
          Length = 1381

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +3

Query: 123 GTKVAIILIATEHTILNYDINVSCATQILPTYRNCV*ETYPTQSPRKFFYHGTATIAIGN 302
           G++ A  L+A   T  +YD+N+S  T    +YR    ++ P  S  +F  H  A + + +
Sbjct: 41  GSQPAEGLVANVITAGDYDLNISATTPWFESYRETFLQSMPA-SDHEFLNHYLACMLVAS 99


>BC127109-1|AAI27110.1| 1381|Homo sapiens KIAA1012 protein protein.
          Length = 1381

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +3

Query: 123 GTKVAIILIATEHTILNYDINVSCATQILPTYRNCV*ETYPTQSPRKFFYHGTATIAIGN 302
           G++ A  L+A   T  +YD+N+S  T    +YR    ++ P  S  +F  H  A + + +
Sbjct: 41  GSQPAEGLVANVITAGDYDLNISATTPWFESYRETFLQSMPA-SDHEFLNHYLACMLVAS 99


>BC059380-1|AAH59380.1|  666|Homo sapiens KIAA1012 protein protein.
          Length = 666

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +3

Query: 123 GTKVAIILIATEHTILNYDINVSCATQILPTYRNCV*ETYPTQSPRKFFYHGTATIAIGN 302
           G++ A  L+A   T  +YD+N+S  T    +YR    ++ P  S  +F  H  A + + +
Sbjct: 95  GSQPAEGLVANVITAGDYDLNISATTPWFESYRETFLQSMPA-SDHEFLNHYLACMLVAS 153


>BC046242-1|AAH46242.1|  919|Homo sapiens AP1B1 protein protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 172 IMISMSHALPKYYLPTVTVCERPTPRNPHENSSI 273
           I+  +++ +PK      ++CER TPR  H NS++
Sbjct: 222 ILDCLANYMPKDDREAQSICERVTPRLSHANSAV 255


>AB023229-1|BAA76856.2| 1452|Homo sapiens KIAA1012 protein protein.
          Length = 1452

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +3

Query: 123 GTKVAIILIATEHTILNYDINVSCATQILPTYRNCV*ETYPTQSPRKFFYHGTATIAIGN 302
           G++ A  L+A   T  +YD+N+S  T    +YR    ++ P  S  +F  H  A + + +
Sbjct: 112 GSQPAEGLVANVITAGDYDLNISATTPWFESYRETFLQSMPA-SDHEFLNHYLACMLVAS 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,381,828
Number of Sequences: 237096
Number of extensions: 1050131
Number of successful extensions: 1456
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)