Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1805
(697 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 6.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 6.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.5
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 8.5
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 500 IYNSLSNKNFHVFFMFNNEYYSHKK 426
I +SLSNK H +NN Y++ K
Sbjct: 81 IISSLSNKTIHNNNNYNNNNYNNYK 105
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 509 ISPIYNSLSNKNFHVFFMFNNEYYSHK 429
IS ++ S+KN HV F+ YSH+
Sbjct: 128 ISSRDSAFSDKNIHVSFLRTVPPYSHQ 154
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 500 IYNSLSNKNFHVFFMFNNEYYSH 432
I +SLSNK H +NN Y++
Sbjct: 81 IISSLSNKTIHNNNNYNNNNYNN 103
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 494 NSLSNKNFHVFFMFNNEYYSHKK 426
N+ +N N++ + NN Y ++KK
Sbjct: 94 NNYNNNNYNNYNYNNNNYNNYKK 116
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 3.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYSFLFILTSSSINRNLIFTFLESLILKNLLIELDTV 399
KIISS+ Y YSN Y ++ N N + + L KN +I ++ +
Sbjct: 313 KIISSLSNNYKYSNYNNY--------NNYNNNNYNNYNKKLYYKNYIINIEQI 357
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 500 IYNSLSNKNFHVFFMFNNEYYSH 432
I +SLSNK H +NN Y++
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNN 336
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 238 RKIISSIL*KYHYSN 282
RKIISS+ Y+Y+N
Sbjct: 312 RKIISSLSNNYNYNN 326
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 346 TFLESLILKNLLIELDTVYAV 408
+FL S + LLI + TVYAV
Sbjct: 673 SFLFSQLYNALLILISTVYAV 693
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 346 TFLESLILKNLLIELDTVYAV 408
+FL S + LLI + TVYAV
Sbjct: 763 SFLFSQLYNALLILISTVYAV 783
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 291 LFILIYSYKFI 323
LF++IYSY FI
Sbjct: 229 LFLIIYSYWFI 239
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 241 KIISSIL*KYHYSNILFYS 297
KIISS+ Y+YSN Y+
Sbjct: 80 KIISSLSNNYNYSNYNNYN 98
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 291 LFILIYSYKFI 323
LF++IYSY FI
Sbjct: 105 LFLIIYSYWFI 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,528
Number of Sequences: 438
Number of extensions: 3440
Number of successful extensions: 42
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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