Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1804
         (715 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BXG7 Cluster: Chromosome undetermined scaffold_134, w...    34   3.0  
UniRef50_A3YAW7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_A0BXG7 Cluster: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 356

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 29/86 (33%), Positives = 40/86 (46%)
 Frame = -2

Query: 708 IQITECLFSYNIFTPQYYIS*TVILLTFIKDKCPYTIPLSSFEVF*LFTCVQKIGTKKHC 529
           IQITECL + N   P+   S  V +  F+    PY    ++F V   F  +  I T    
Sbjct: 89  IQITECLENINNCNPKQEFSFEVQMTFFLICISPYQ---NAFTVINYFFTLYPIQTFHLI 145

Query: 528 IFICIYTFQVIFLFINSKLFNISNGL 451
           IF  I    +  LFI++K F  S+ L
Sbjct: 146 IFDTINQSAISILFISNKQFYTSSPL 171


>UniRef50_A3YAW7 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MED121|Rep: Putative uncharacterized
           protein - Marinomonas sp. MED121
          Length = 394

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -3

Query: 422 FIPNKNTQAQVPPLRTLLYTFKLFRIKHMRTCLKLRKFNEEQLTSRI 282
           +  NKN   +VP  R L++  K ++ KHM   ++LR    E+L+S +
Sbjct: 307 YYENKNYDCEVPKKRALVFVSKSYKEKHMFLDIELRGKALEKLSSTL 353


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,203,565
Number of Sequences: 1657284
Number of extensions: 10751302
Number of successful extensions: 29804
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29098
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)