SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1803
         (569 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X92474-1|CAA63212.1| 1972|Homo sapiens protein ( H.sapiens mRNA ...    81   3e-15
D43948-1|BAA07892.2| 2038|Homo sapiens KIAA0097 protein protein.       80   6e-15
BC120869-1|AAI20870.1| 2032|Homo sapiens cytoskeleton associated...    80   6e-15
BC035554-1|AAH35554.1|  953|Homo sapiens CKAP5 protein protein.        80   6e-15
BC120870-1|AAI20871.1| 1925|Homo sapiens CKAP5 protein protein.        71   4e-12
U51903-1|AAB37765.1| 1575|Homo sapiens RasGAP-related protein pr...    32   1.6  
AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ moti...    32   1.6  
AB208856-1|BAD92093.1| 1155|Homo sapiens IQ motif containing GTP...    32   1.6  
L33075-1|AAA59187.1| 1657|Homo sapiens ras GTPase-activating-lik...    30   5.0  
D29640-1|BAA06123.2| 1678|Homo sapiens KIAA0051 protein.               30   5.0  
BC139731-1|AAI39732.1| 1657|Homo sapiens IQ motif containing GTP...    30   5.0  
X59618-1|CAA42181.1|  389|Homo sapiens small subunit ribonucleot...    29   8.7  
S40301-1|AAA09577.1|  389|Homo sapiens ribonucleotide reductase ...    29   8.7  
CR392000-1|CAM28352.1|  698|Homo sapiens quiescin Q6 sulfhydryl ...    29   8.7  
BC047604-1|AAH47604.2|  671|Homo sapiens QSOX2 protein protein.        29   8.7  
BC030154-1|AAH30154.1|  389|Homo sapiens ribonucleotide reductas...    29   8.7  
BC001886-1|AAH01886.1|  389|Homo sapiens ribonucleotide reductas...    29   8.7  
AY032750-1|AAK51163.1|  389|Homo sapiens ribonucleotide reductas...    29   8.7  
AL834369-1|CAD39032.1|  541|Homo sapiens hypothetical protein pr...    29   8.7  
AL138781-4|CAI16880.1|  283|Homo sapiens quiescin Q6 sulfhydryl ...    29   8.7  
AL138781-1|CAI16881.2|  698|Homo sapiens quiescin Q6 sulfhydryl ...    29   8.7  
AK128077-1|BAC87262.1|  576|Homo sapiens protein ( Homo sapiens ...    29   8.7  
AJ318051-1|CAC85331.1|  698|Homo sapiens putative sulfhydryl oxi...    29   8.7  
AC104794-2|AAX93099.1|  389|Homo sapiens unknown protein.              29   8.7  

>X92474-1|CAA63212.1| 1972|Homo sapiens protein ( H.sapiens mRNA for
            ch-TOG protein. ).
          Length = 1972

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 48/136 (35%), Positives = 77/136 (56%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            L  IH+F K +P    K+    S+ P RT+KTL+HTL K+KG  I++HLT + + NES+L
Sbjct: 1673 LLDIHIFMKVFPKEKLKQCK--SEFPIRTLKTLLHTLCKLKGPKILDHLTMIDNKNESEL 1730

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
              +L +++K        ++  +   G S + + +  A          V++ LA I K+IG
Sbjct: 1731 EAHLCRMMKHSMDQTGSKSDKETAKGASRIDAKSSKA---------KVNDFLAEIFKKIG 1781

Query: 200  SKEHHKEALVQLYDLR 153
            SKE+ KE L +LY+ +
Sbjct: 1782 SKENTKEGLAELYEYK 1797


>D43948-1|BAA07892.2| 2038|Homo sapiens KIAA0097 protein protein.
          Length = 2038

 Score = 79.8 bits (188), Expect = 6e-15
 Identities = 48/136 (35%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            L  IH+F K +P    K+    S+ P RT+KTL+HTL K+KG  I++HLT + + NES+L
Sbjct: 1739 LLDIHIFMKVFPKEKLKQCK--SEFPIRTLKTLLHTLCKLKGPKILDHLTMIDNKNESEL 1796

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
              +L +++K        ++  +   G S +   +  A          V++ LA I K+IG
Sbjct: 1797 EAHLCRMMKHSMDQTGSKSDKETEKGASRIDEKSSKA---------KVNDFLAEIFKKIG 1847

Query: 200  SKEHHKEALVQLYDLR 153
            SKE+ KE L +LY+ +
Sbjct: 1848 SKENTKEGLAELYEYK 1863


>BC120869-1|AAI20870.1| 2032|Homo sapiens cytoskeleton associated
            protein 5 protein.
          Length = 2032

 Score = 79.8 bits (188), Expect = 6e-15
 Identities = 48/136 (35%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            L  IH+F K +P    K+    S+ P RT+KTL+HTL K+KG  I++HLT + + NES+L
Sbjct: 1733 LLDIHIFMKVFPKEKLKQCK--SEFPIRTLKTLLHTLCKLKGPKILDHLTMIDNKNESEL 1790

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
              +L +++K        ++  +   G S +   +  A          V++ LA I K+IG
Sbjct: 1791 EAHLCRMMKHSMDQTGSKSDKETEKGASRIDEKSSKA---------KVNDFLAEIFKKIG 1841

Query: 200  SKEHHKEALVQLYDLR 153
            SKE+ KE L +LY+ +
Sbjct: 1842 SKENTKEGLAELYEYK 1857


>BC035554-1|AAH35554.1|  953|Homo sapiens CKAP5 protein protein.
          Length = 953

 Score = 79.8 bits (188), Expect = 6e-15
 Identities = 48/136 (35%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            L  IH+F K +P    K+    S+ P RT+KTL+HTL K+KG  I++HLT + + NES+L
Sbjct: 654  LLDIHIFMKVFPKEKLKQCK--SEFPIRTLKTLLHTLCKLKGPKILDHLTMIDNKNESEL 711

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
              +L +++K        ++  +   G S +   +  A          V++ LA I K+IG
Sbjct: 712  EAHLCRMMKHSMDQTGSKSDKETEKGASRIDEKSSKA---------KVNDFLAEIFKKIG 762

Query: 200  SKEHHKEALVQLYDLR 153
            SKE+ KE L +LY+ +
Sbjct: 763  SKENTKEGLAELYEYK 778


>BC120870-1|AAI20871.1| 1925|Homo sapiens CKAP5 protein protein.
          Length = 1925

 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKG-------SSIVNHLTQVP 402
            L  IH+F K +P    K+    S+ P RT+KTL+HTL K+KG         I++HLT + 
Sbjct: 1619 LLDIHIFMKVFPKEKLKQCK--SEFPIRTLKTLLHTLCKLKGPKSCMCLPQILDHLTMID 1676

Query: 401  DVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELA 222
            + NES+L  +L +++K        ++  +   G S +   +  A          V++ LA
Sbjct: 1677 NKNESELEAHLCRMMKHSMDQTGSKSDKETEKGASRIDEKSSKA---------KVNDFLA 1727

Query: 221  LILKRIGSKEHHKEALVQLYDLR 153
             I K+IGSKE+ KE L +LY+ +
Sbjct: 1728 EIFKKIGSKENTKEGLAELYEYK 1750


>U51903-1|AAB37765.1| 1575|Homo sapiens RasGAP-related protein
            protein.
          Length = 1575

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 539  YKAYPNSFWKKNLDISDTPY--RTVKTLVHTLVKMKGSSIVNHLTQVPD------VNESD 384
            YKA+ N    +  + S  PY   T + L +  VK K  + + +L +V D      ++  D
Sbjct: 1008 YKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLEASIENLRRVTDKVLNSIISSLD 1067

Query: 383  LYPYLLKVLKQLKLDEKKENTPDA 312
            L PY L+ + ++  +   E  PDA
Sbjct: 1068 LLPYGLRYIAKVLKNSIHEKFPDA 1091


>AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ motif
           containing GTPase activating protein 2 protein.
          Length = 1071

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 539 YKAYPNSFWKKNLDISDTPY--RTVKTLVHTLVKMKGSSIVNHLTQVPD------VNESD 384
           YKA+ N    +  + S  PY   T + L +  VK K  + + +L +V D      ++  D
Sbjct: 504 YKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLEASIENLRRVTDKVLNSIISSLD 563

Query: 383 LYPYLLKVLKQLKLDEKKENTPDA 312
           L PY L+ + ++  +   E  PDA
Sbjct: 564 LLPYGLRYIAKVLKNSIHEKFPDA 587


>AB208856-1|BAD92093.1| 1155|Homo sapiens IQ motif containing GTPase
           activating protein 2 variant protein.
          Length = 1155

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 539 YKAYPNSFWKKNLDISDTPY--RTVKTLVHTLVKMKGSSIVNHLTQVPD------VNESD 384
           YKA+ N    +  + S  PY   T + L +  VK K  + + +L +V D      ++  D
Sbjct: 588 YKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLEASIENLRRVTDKVLNSIISSLD 647

Query: 383 LYPYLLKVLKQLKLDEKKENTPDA 312
           L PY L+ + ++  +   E  PDA
Sbjct: 648 LLPYGLRYIAKVLKNSIHEKFPDA 671


>L33075-1|AAA59187.1| 1657|Homo sapiens ras GTPase-activating-like
            protein protein.
          Length = 1657

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
 Frame = -1

Query: 539  YKAYPNSFWKKNLDISDTPYRTV--KTLVHTLVKMKGSSIVNHLTQVPD------VNESD 384
            YK++ N    +  + S  PY     + L H  VK +  S + ++  V D      V+  D
Sbjct: 1095 YKSWVNQMESQTGEASKLPYDVTPEQALAHEEVKTRLDSSIRNMRAVTDKFLSAIVSSVD 1154

Query: 383  LYPYLLKVLKQLKLDEKKENTPDA 312
              PY ++ + ++  D   E  PDA
Sbjct: 1155 KIPYGMRFIAKVLKDSLHEKFPDA 1178


>D29640-1|BAA06123.2| 1678|Homo sapiens KIAA0051 protein.
          Length = 1678

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
 Frame = -1

Query: 539  YKAYPNSFWKKNLDISDTPYRTV--KTLVHTLVKMKGSSIVNHLTQVPD------VNESD 384
            YK++ N    +  + S  PY     + L H  VK +  S + ++  V D      V+  D
Sbjct: 1116 YKSWVNQMESQTGEASKLPYDVTPEQALAHEEVKTRLDSSIRNMRAVTDKFLSAIVSSVD 1175

Query: 383  LYPYLLKVLKQLKLDEKKENTPDA 312
              PY ++ + ++  D   E  PDA
Sbjct: 1176 KIPYGMRFIAKVLKDSLHEKFPDA 1199


>BC139731-1|AAI39732.1| 1657|Homo sapiens IQ motif containing GTPase
            activating protein 1 protein.
          Length = 1657

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
 Frame = -1

Query: 539  YKAYPNSFWKKNLDISDTPYRTV--KTLVHTLVKMKGSSIVNHLTQVPD------VNESD 384
            YK++ N    +  + S  PY     + L H  VK +  S + ++  V D      V+  D
Sbjct: 1095 YKSWVNQMESQTGEASKLPYDVTPEQALAHEEVKTRLDSSIRNMRAVTDKFLSAIVSSVD 1154

Query: 383  LYPYLLKVLKQLKLDEKKENTPDA 312
              PY ++ + ++  D   E  PDA
Sbjct: 1155 KIPYGMRFIAKVLKDSLHEKFPDA 1178


>X59618-1|CAA42181.1|  389|Homo sapiens small subunit ribonucleotide
           reductase protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -1

Query: 410 QVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVT 279
           +VP    +D     L  LK L L +K ENTP A++G  VLAS T
Sbjct: 5   RVPLAPITDPQQLQLSPLKGLSLVDK-ENTPPALSGTRVLASKT 47


>S40301-1|AAA09577.1|  389|Homo sapiens ribonucleotide reductase R2
           subunit protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -1

Query: 410 QVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVT 279
           +VP    +D     L  LK L L +K ENTP A++G  VLAS T
Sbjct: 5   RVPLAPITDPQQLQLSPLKGLSLVDK-ENTPPALSGTRVLASKT 47


>CR392000-1|CAM28352.1|  698|Homo sapiens quiescin Q6 sulfhydryl
           oxidase 2 protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 380 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 439

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 440 TVEASTHPDALVG 452


>BC047604-1|AAH47604.2|  671|Homo sapiens QSOX2 protein protein.
          Length = 671

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 353 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 412

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 413 TVEASTHPDALVG 425


>BC030154-1|AAH30154.1|  389|Homo sapiens ribonucleotide reductase
           M2 polypeptide protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -1

Query: 410 QVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVT 279
           +VP    +D     L  LK L L +K ENTP A++G  VLAS T
Sbjct: 5   RVPLAPITDPQQLQLSPLKGLSLVDK-ENTPPALSGTRVLASKT 47


>BC001886-1|AAH01886.1|  389|Homo sapiens ribonucleotide reductase
           M2 polypeptide protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -1

Query: 410 QVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVT 279
           +VP    +D     L  LK L L +K ENTP A++G  VLAS T
Sbjct: 5   RVPLAPITDPQQLQLSPLKGLSLVDK-ENTPPALSGTRVLASKT 47


>AY032750-1|AAK51163.1|  389|Homo sapiens ribonucleotide reductase
           M2 subunit protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -1

Query: 410 QVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVT 279
           +VP    +D     L  LK L L +K ENTP A++G  VLAS T
Sbjct: 5   RVPLAPITDPQQLQLSPLKGLSLVDK-ENTPPALSGTRVLASKT 47


>AL834369-1|CAD39032.1|  541|Homo sapiens hypothetical protein
           protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 223 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 282

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 283 TVEASTHPDALVG 295


>AL138781-4|CAI16880.1|  283|Homo sapiens quiescin Q6 sulfhydryl
           oxidase 2 protein.
          Length = 283

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 147 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 206

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 207 TVEASTHPDALVG 219


>AL138781-1|CAI16881.2|  698|Homo sapiens quiescin Q6 sulfhydryl
           oxidase 2 protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 380 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 439

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 440 TVEASTHPDALVG 452


>AK128077-1|BAC87262.1|  576|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46198 fis, clone TESTI4007671, weakly  similar
           to Mus musculus quiescin Q6 (Qscn6). ).
          Length = 576

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 258 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 317

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 318 TVEASTHPDALVG 330


>AJ318051-1|CAC85331.1|  698|Homo sapiens putative sulfhydryl
           oxidase precursor protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 515 WKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVP-DVNESDLYPYLLKVLKQL-KL 342
           W  +L +   PY  V  LV+  +++ G  + NH+  V    + S+L  Y   + K    L
Sbjct: 380 WLASLPLDRIPYNAVLDLVNNKMRISGIFLTNHIKWVGCQGSRSELRGYPCSLWKLFHTL 439

Query: 341 DEKKENTPDAING 303
             +    PDA+ G
Sbjct: 440 TVEASTHPDALVG 452


>AC104794-2|AAX93099.1|  389|Homo sapiens unknown protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -1

Query: 410 QVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVT 279
           +VP    +D     L  LK L L +K ENTP A++G  VLAS T
Sbjct: 5   RVPLAPITDPQQLQLSPLKGLSLVDK-ENTPPALSGTRVLASKT 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,688,533
Number of Sequences: 237096
Number of extensions: 1502009
Number of successful extensions: 3789
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3783
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -