Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1803
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023496-1|AAY84896.1| 2042|Drosophila melanogaster LP04448p pro...    77   1e-14
AY058412-1|AAL13641.1| 1029|Drosophila melanogaster GH18634p pro...    77   1e-14
AJ249115-1|CAB55772.1| 2050|Drosophila melanogaster microtubule ...    77   1e-14
AE014297-2141|AAF55269.2| 2049|Drosophila melanogaster CG5000-PA...    77   1e-14

>BT023496-1|AAY84896.1| 2042|Drosophila melanogaster LP04448p protein.
          Length = 2042

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/136 (29%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            + ++H F  A P+++W+     SDTP RT+KT++H + K+KG++I+ HL Q+P    S+L
Sbjct: 1783 ILEVHEFMLALPSTWWQNRP--SDTPMRTIKTILHNMAKVKGNAILQHLNQIP--THSEL 1838

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
            + YL+++LK  + D          +   + AS      + + R+    H+ ++ I K I 
Sbjct: 1839 HTYLIRILKNFQKDG---------SASGIGASPQRAKEIASKRISHQTHDTVSQIFKLIS 1889

Query: 200  SKEHHKEALVQLYDLR 153
             ++  ++ L +LYD +
Sbjct: 1890 DRDTKQQGLQKLYDFK 1905


>AY058412-1|AAL13641.1| 1029|Drosophila melanogaster GH18634p protein.
          Length = 1029

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/136 (29%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            + ++H F  A P+++W+     SDTP RT+KT++H + K+KG++I+ HL Q+P    S+L
Sbjct: 762  ILEVHEFMLALPSTWWQNRP--SDTPMRTIKTILHNMAKVKGNAILQHLNQIP--THSEL 817

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
            + YL+++LK  + D          +   + AS      + + R+    H+ ++ I K I 
Sbjct: 818  HTYLIRILKNFQKDG---------SASGIGASPQRAKEIASKRISHQTHDTVSQIFKLIS 868

Query: 200  SKEHHKEALVQLYDLR 153
             ++  ++ L +LYD +
Sbjct: 869  DRDTKQQGLQKLYDFK 884


>AJ249115-1|CAB55772.1| 2050|Drosophila melanogaster microtubule
            associated protein protein.
          Length = 2050

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/136 (29%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            + ++H F  A P+++W+     SDTP RT+KT++H + K+KG++I+ HL Q+P    S+L
Sbjct: 1781 ILEVHEFMLALPSTWWQNRP--SDTPMRTIKTILHNMAKVKGNAILQHLNQIP--THSEL 1836

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
            + YL+++LK  + D          +   + AS      + + R+    H+ ++ I K I 
Sbjct: 1837 HTYLIRILKNFQKDG---------SASGIGASPQRAKEIASKRISHQTHDTVSQIFKLIS 1887

Query: 200  SKEHHKEALVQLYDLR 153
             ++  ++ L +LYD +
Sbjct: 1888 DRDTKQQGLQKLYDFK 1903


>AE014297-2141|AAF55269.2| 2049|Drosophila melanogaster CG5000-PA
            protein.
          Length = 2049

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/136 (29%), Positives = 76/136 (55%)
 Frame = -1

Query: 560  LYKIHLFYKAYPNSFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL 381
            + ++H F  A P+++W+     SDTP RT+KT++H + K+KG++I+ HL Q+P    S+L
Sbjct: 1782 ILEVHEFMLALPSTWWQNRP--SDTPMRTIKTILHNMAKVKGNAILQHLNQIP--THSEL 1837

Query: 380  YPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIG 201
            + YL+++LK  + D          +   + AS      + + R+    H+ ++ I K I 
Sbjct: 1838 HTYLIRILKNFQKDG---------SASGIGASPQRAKEIASKRISHQTHDTVSQIFKLIS 1888

Query: 200  SKEHHKEALVQLYDLR 153
             ++  ++ L +LYD +
Sbjct: 1889 DRDTKQQGLQKLYDFK 1904


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,236,075
Number of Sequences: 53049
Number of extensions: 443808
Number of successful extensions: 1421
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)