Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1803
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas...    29   2.4  
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ...    29   2.4  
AF067936-3|AAC19216.2|  922|Caenorhabditis elegans Hypothetical ...    29   2.4  
AL032627-12|CAB63357.1|  577|Caenorhabditis elegans Hypothetical...    29   3.1  
AL021386-2|CAA16165.1|  240|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1276

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 193 SLLPMRLRMRASSSCTARGRRPAVSAALGV-TDARTEPP 306
           SL+P+R R+R+SSS T R     +   L + T  ++ PP
Sbjct: 606 SLIPIRFRLRSSSSGTTRKISAMIDRKLSIFTRKKSTPP 644


>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
           protein T01A4.1c protein.
          Length = 1276

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 193 SLLPMRLRMRASSSCTARGRRPAVSAALGV-TDARTEPP 306
           SL+P+R R+R+SSS T R     +   L + T  ++ PP
Sbjct: 606 SLIPIRFRLRSSSSGTTRKISAMIDRKLSIFTRKKSTPP 644


>AF067936-3|AAC19216.2|  922|Caenorhabditis elegans Hypothetical
            protein C24G6.3 protein.
          Length = 922

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 341  DEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIGSKEHHKEALVQL 165
            D    N  DA+NG ++LA   P         P+++H E+ L++  I     HK+ L+++
Sbjct: 858  DSNMTNLEDALNGLNILARRQP---------PKSLHSEVPLVVTSINKILGHKKRLLRM 907


>AL032627-12|CAB63357.1|  577|Caenorhabditis elegans Hypothetical
           protein Y41C4A.9 protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
 Frame = -1

Query: 524 NSFWKKNLD------ISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDL------ 381
           + FW + LD      ++DT  RT   + H L  +  SSI      +      DL      
Sbjct: 25  SDFWSEKLDEIGSAHLADTKSRTKSAVKHELTGIGSSSIYKGTRDLQLPKSEDLSNFGWN 84

Query: 380 ---YPYLLKVLKQLKLDEKKENTPDAING 303
                +L  +L+++++DEKKE   +A  G
Sbjct: 85  EGVLEHLQVLLEEIEVDEKKEEQIEAERG 113


>AL021386-2|CAA16165.1|  240|Caenorhabditis elegans Hypothetical
           protein F57E7.2 protein.
          Length = 240

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
 Frame = -1

Query: 521 SFWKKNLDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDLYPYLLKVLKQL-K 345
           SFW     +SD     + + V  L+ +K SS+  HL     + + + Y + L  +  L K
Sbjct: 42  SFWYNRSAMSDYSVPKLDSEVQYLIVVKNSSLTKHL-----IRKLESYNWTLPAIATLDK 96

Query: 344 LDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIGSKEHH 186
              K   T D IN   V +S    + L  GR  + V + +  +L +  +K+++
Sbjct: 97  WMSKHWVTIDPINREQVWSS----SGLNLGR--KEVRDAVKKLLYKFKAKKNY 143


>Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical
           protein ZK632.2 protein.
          Length = 710

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 20/81 (24%), Positives = 38/81 (46%)
 Frame = -1

Query: 452 LVKMKGSSIVNHLTQVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPN 273
           LVK+   ++V  L Q+     +D   +L K++  ++  ++ + TP    G S  A++   
Sbjct: 497 LVKIAKPAVVKGLEQLETTAANDRQAFLKKLMG-VRARKEIDQTPSQGPGPSTSATLPAT 555

Query: 272 AALTAGRLPRAVHEELALILK 210
            A T+ +     HE+    LK
Sbjct: 556 VAPTSTKAVEVEHEKKMTPLK 576


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,494,378
Number of Sequences: 27780
Number of extensions: 215338
Number of successful extensions: 611
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)