Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1802
(730 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 30 0.017
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 30 0.017
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 30 0.017
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 26 0.36
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 26 0.36
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 26 0.36
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 26 0.36
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 23 1.9
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 22 4.4
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 5.8
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 7.7
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 30.3 bits (65), Expect = 0.017
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 129 YNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVN 305
YN+ +P AQ H N E P+ T + E PP+ + YH Q+ Q +N
Sbjct: 23 YNYTSDIPNAQQMPP--HYSNYHYEDPYGYTGS-EETPPSPQEVYYHHQTIPQDNPIIN 78
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 30.3 bits (65), Expect = 0.017
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 129 YNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVN 305
YN+ +P AQ H N E P+ T + E PP+ + YH Q+ Q +N
Sbjct: 23 YNYTSDIPNAQQMPP--HYSNYHYEDPYGYTGS-EETPPSPQEVYYHHQTIPQDNPIIN 78
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 30.3 bits (65), Expect = 0.017
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 129 YNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVN 305
YN+ +P AQ H N E P+ T + E PP+ + YH Q+ Q +N
Sbjct: 23 YNYTSDIPNAQQMPP--HYSNYHYEDPYGYTGS-EETPPSPQEVYYHHQTIPQDNPIIN 78
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.8 bits (54), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 126 LYNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPP-ADHQGNYHEQSKQ 284
L N LP Q P+ + P P ++ + S PP D GN+H Q +Q
Sbjct: 6 LMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.8 bits (54), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 126 LYNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPP-ADHQGNYHEQSKQ 284
L N LP Q P+ + P P ++ + S PP D GN+H Q +Q
Sbjct: 6 LMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.8 bits (54), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 126 LYNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPP-ADHQGNYHEQSKQ 284
L N LP Q P+ + P P ++ + S PP D GN+H Q +Q
Sbjct: 6 LMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 25.8 bits (54), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 126 LYNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPP-ADHQGNYHEQSKQ 284
L N LP Q P+ + P P ++ + S PP D GN+H Q +Q
Sbjct: 6 LMNPGTALPTYQQPQHISGVVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = -3
Query: 449 YVRLAWC--WRRLE-CAKVVKTRRRCW 378
Y R W + LE CAK+ KT+R C+
Sbjct: 89 YKRRTWTRLLKNLESCAKIKKTKRYCY 115
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 294 QTVNQFVPNGGELVPSISEYEQHITLNGPTASPSF 398
QT+N G L+ +S +E LN + PSF
Sbjct: 387 QTINFMFSFGFILLRFLSVFESCTRLNNESRKPSF 421
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 397 KLGDAVGPLRVICCSYSEIDGTNSPP 320
K+ D GP + + Y + G +PP
Sbjct: 271 KVIDMTGPQQRVLSGYHALSGLKAPP 296
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 7.7
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +3
Query: 195 PTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPNGGE 329
PT P T + + H H Q Q H Q Q + GG+
Sbjct: 151 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQ--QQHMMYGGQ 193
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 7.7
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +3
Query: 195 PTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPNGGE 329
PT P T + + H H Q Q H Q Q + GG+
Sbjct: 153 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQ--QQHMMYGGQ 195
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,498
Number of Sequences: 336
Number of extensions: 2620
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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