Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1802
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_7254| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_55898| Best HMM Match : Carb_anhydrase (HMM E-Value=3.6) 32 0.55
SB_39776| Best HMM Match : Acetyltransf_1 (HMM E-Value=1e-23) 31 0.96
SB_49744| Best HMM Match : Tubulin_C (HMM E-Value=6.7) 31 0.96
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 31 1.3
SB_39893| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21) 31 1.3
SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) 31 1.3
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 31 1.3
SB_20012| Best HMM Match : Retrotrans_gag (HMM E-Value=0.005) 31 1.3
SB_9880| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 31 1.3
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52164| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21) 31 1.3
SB_52157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 31 1.3
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 31 1.3
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 31 1.3
SB_15492| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 31 1.3
SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 31 1.3
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 31 1.3
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 31 1.3
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3) 30 1.7
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 30 1.7
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016) 30 1.7
SB_4543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34707| Best HMM Match : RuvA_C (HMM E-Value=1.2) 30 1.7
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_53068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 30 2.2
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18) 29 2.9
SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79) 29 2.9
SB_51276| Best HMM Match : rve (HMM E-Value=1.4e-05) 29 2.9
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_32093| Best HMM Match : MCM (HMM E-Value=0.004) 29 3.9
SB_58158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 29 3.9
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.9
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 5.1
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.1
SB_34857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_34601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_28807| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 5.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 29 5.1
SB_57148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1) 29 5.1
SB_6724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_45661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_32409| Best HMM Match : Oxidored_q2 (HMM E-Value=0.081) 28 6.7
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_1938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 28 8.9
SB_29859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_19167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.9
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_14906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_2496| Best HMM Match : GRP (HMM E-Value=9) 28 8.9
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 159 QDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQ 308
Q K Q H Q ++ QQ H+ ++ D Q +H+Q +QQH Q
Sbjct: 1091 QHDKQQQHDQQQQHDQ--QQQHDQQQQQRHDQQQQHHDQQQQQHHDQQQQ 1138
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 159 QDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQ 296
Q + Q H Q ++ QQ H+ ++ Q +H+Q +Q H+Q
Sbjct: 1097 QHDQQQQHDQQQQHDQQQQQRHDQQQQHHDQQQQQHHDQQQQHHEQ 1142
>SB_7254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 88 DGGDGDTDPN*SDGLEDGKG 29
DGGDGD D N DG +DG G
Sbjct: 189 DGGDGDVDGNDGDGDDDGDG 208
>SB_55898| Best HMM Match : Carb_anhydrase (HMM E-Value=3.6)
Length = 531
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 213 QQTHNPSERPPADHQGNYHEQSK---QQHQQTVNQFVPNGGELVPSISEYEQHITLNGP 380
Q +ERP D + E K Q +Q VN N E+ P + +YEQ +T NGP
Sbjct: 186 QDAFQSNERPLPDVTLSAAEPDKDVTQYEEQLVNSLTKN--EISPPLIKYEQLVTQNGP 242
>SB_39776| Best HMM Match : Acetyltransf_1 (HMM E-Value=1e-23)
Length = 237
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -2
Query: 267 GSCLDGLLVVFPRDYVFVEKASQWVNFEYG---TGFLGLVLQEVVDGSYITLVKMVAGGR 97
G+CL L + Y++ + +S WV EY G +GL+ E L +M
Sbjct: 106 GACLSADLRDIDKSYMYAKGSSMWV-AEYNGKVVGMVGLIHSENHPDGVAELQRMSVSSS 164
Query: 96 DWKTGVMGTLIR 61
+ G+ G LIR
Sbjct: 165 VRRKGIAGKLIR 176
>SB_49744| Best HMM Match : Tubulin_C (HMM E-Value=6.7)
Length = 370
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
G+ G G G +DGGDGD D + DG DG G
Sbjct: 327 GDGGGGDGGGDDGGDGDGDGD-GDGDGDGDG 356
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_39893| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21)
Length = 137
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1022
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_20012| Best HMM Match : Retrotrans_gag (HMM E-Value=0.005)
Length = 202
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 44 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 83
>SB_9880| Best HMM Match : FlaC_arch (HMM E-Value=0.77)
Length = 272
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 185 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 224
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 135 FHQQLPVAQDPKSQFHIQNSPTE--RPFQQTHNPSERPPADHQGNYHEQSKQQHQQT 299
F Q P +Q + F +P + +PF H P + Q Y +S QQ Q T
Sbjct: 377 FQPQFPTSQHSQQPFQSGQAPQQFQQPFPTEHQPQQPFRPGQQCQYSTRSDQQTQST 433
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFV 314
+ LP + P H+ N+ +E T P+E PAD + + S + + +Q V
Sbjct: 1762 ESLPADEPPSISRHLSNTSSEPISGDTPTPTEPAPADEPISTPDHSSSKPVEQCDQAV 1819
>SB_52164| Best HMM Match : Retrotrans_gag (HMM E-Value=0.21)
Length = 137
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_52157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 209 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 248
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 186 QNSPTERPFQQTH-NPSERPPADHQGNYHEQSKQQHQQ 296
QN P +R ++ NP E+PP DH+ Y + ++H +
Sbjct: 1016 QNEPRDRVKEEVRPNPEEKPPRDHE--YSRERDREHSR 1051
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 133 LYNVGEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
++N G+ GCG G DGD D S+ ++DG G
Sbjct: 72 VHNNGDGGCGGGGCGSSSDGDNDD--SNDVDDGGG 104
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_15492| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 580
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 462
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 145 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 184
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L QH + T
Sbjct: 370 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 409
>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 99
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDGDTDPN*SDG 47
G+DG G G +DG DGD D N DG
Sbjct: 19 GDDGDGDNG-DDGDDGDVDDNVCDG 42
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 331 WCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
W R F+N +LP +L VLT L QH + T
Sbjct: 26 WKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIKDCT 64
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 65 ISVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKKP-VPYSKFTH*EAFSTNT*SLGKT 241
+S PITP S P ++ PST S + P P P + T +T S T
Sbjct: 237 LSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPST 296
Query: 242 TSRPSRQLP*TVKTTASTNCKP 307
S PS + +T ST P
Sbjct: 297 PSTPSTPSTPSAPSTPSTPSTP 318
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 65 ISVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKKP-VPYSKFTH*EAFSTNT*SLGKT 241
+S PITP S P ++ PST S + P P P + T +T S T
Sbjct: 787 LSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPST 846
Query: 242 TSRPSRQLP*TVKTTASTNCKP 307
S PS + +T ST P
Sbjct: 847 PSTPSTPSTPSAPSTPSTPSTP 868
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +2
Query: 68 SVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKKP-VPYSKFTH*EAFSTNT*SLGKTT 244
S P TP+ S P + PST S + P P P + T + +T S T
Sbjct: 46 STPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTP 105
Query: 245 SRPSRQLP*TVKTTASTNCKP 307
S PS + +T ST P
Sbjct: 106 STPSTPSTPSTPSTPSTPSTP 126
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 68 SVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKKPVPYSKFTH*EAFST-NT*SLGKTT 244
S PITP S P PST S + P P S + ST +T S+ T
Sbjct: 160 STPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTP 219
Query: 245 SRPSRQLP*TVKTTASTNCKPV 310
S P+ + +T ST P+
Sbjct: 220 SMPNTPSTPSTPSTPSTLSTPI 241
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 68 SVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKKPVPYSKFTH*EAFST-NT*SLGKTT 244
S PITP S P PST S + P P S + ST +T S+ T
Sbjct: 710 STPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTP 769
Query: 245 SRPSRQLP*TVKTTASTNCKPV 310
S P+ + +T ST P+
Sbjct: 770 SMPNTPSTPSTPSTPSTLSTPI 791
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 68 SVPITPVFQSLP--PATIFTNVI*LPSTTSCSTRPKKP-VPYSKFTH*EAFSTNT*SLGK 238
S+P TP S P P+T+ T + PST S + P P +P + T + +T
Sbjct: 220 SMPNTPSTPSTPSTPSTLSTPIT--PSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPN 277
Query: 239 TTSRPSRQLP*TVKTTASTNCKP 307
T S PS + +T ST P
Sbjct: 278 TPSTPSTPSMPSTPSTPSTPSTP 300
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 68 SVPITPVFQSLP--PATIFTNVI*LPSTTSCSTRPKKP-VPYSKFTH*EAFSTNT*SLGK 238
S+P TP S P P+T+ T + PST S + P P +P + T + +T
Sbjct: 770 SMPNTPSTPSTPSTPSTLSTPIT--PSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPN 827
Query: 239 TTSRPSRQLP*TVKTTASTNCKP 307
T S PS + +T ST P
Sbjct: 828 TPSTPSTPSMPSTPSTPSTPSTP 850
>SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016)
Length = 702
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 138 HQQLPVAQDPKSQFHIQNSPTERPFQQTH--NPSERPPADHQGNYHEQS 278
H Q P + P+S+ H Q+S P + H +P+ R P Q H QS
Sbjct: 444 HSQSPTVRAPQSEPHSQSSTVRAPQSEPHSQSPTVRAP---QSELHSQS 489
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/89 (23%), Positives = 32/89 (35%)
Frame = +3
Query: 138 HQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVP 317
H Q P + P+S+ H Q+ P + H+ S A Q H QS
Sbjct: 430 HSQTPTFRAPQSEPHSQSPTVRAPQSEPHSQSSTVRAP-QSEPHSQSPTVRAPQSELHSQ 488
Query: 318 NGGELVPSISEYEQHITLNGPTASPSFDN 404
+ P + Q T+ P + P F +
Sbjct: 489 SPTLRAPQSDPHFQSPTVRAPHSDPHFQS 517
>SB_4543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1
Query: 109 CGRKGLEDGGDGDTDPN*SDGLED 38
CGRKG D GD D D SDG +D
Sbjct: 190 CGRKGGCDDGDEDNDDGDSDGDDD 213
>SB_34707| Best HMM Match : RuvA_C (HMM E-Value=1.2)
Length = 112
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 331 WCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
W R F+N +LP +L VLT L QH + T
Sbjct: 26 WKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQHIKDCT 64
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQH 432
+W R F+N +LP +L VLT L QH
Sbjct: 316 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFQH 350
>SB_53068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 180 HIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVP 317
H PT P Q N ER P D + YHE S+ QH + + +P
Sbjct: 49 HEDAGPTISPSAQ--NVYEREPLDFR-EYHESSRLQHDISTTETIP 91
>SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 434
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQH 432
+W R F+N +LP +L VLT L QH
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVPPTLFQH 59
>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
Length = 2111
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDGDTDPN*SDGLEDGKGPL*KL 14
G+ G G + GDGD+D N DG DG G + KL
Sbjct: 1826 GDTSDGDGGGDSDGDGDSDDNDGDG--DGDGDIYKL 1859
>SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79)
Length = 296
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 115 DGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
DG G G +DG G D DG++DG G
Sbjct: 223 DGDGDDGDDDGDGGGDDDGDGDGVDDGDG 251
>SB_51276| Best HMM Match : rve (HMM E-Value=1.4e-05)
Length = 324
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 240 PPADHQGNYHEQSKQQHQQTVNQFVPNGGELVPSISEYEQHITLNGPTAS 389
P H G Y EQ K+ H + +P G + + S Y ++ P S
Sbjct: 2 PKFGHVGPYSEQVKRDHDGKIVDIIPKGNPMEDAGSLYPNPWSMRAPELS 51
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQ 308
QQ Q + Q H Q+ + QQ H ++ HQ + +Q +QQ QQ Q
Sbjct: 278 QQQQQQQQQQHQLHQQHQLHQH--QQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQ 331
>SB_32093| Best HMM Match : MCM (HMM E-Value=0.004)
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -1
Query: 127 NVGEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
NVG+DG G G DGG GD D G DG G
Sbjct: 68 NVGDDGGGDGGGCDGGGGDGDGG-GGGDGDGGG 99
>SB_58158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -1
Query: 127 NVGEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
NVG+DG G G DGG GD D G DG G
Sbjct: 83 NVGDDGGGDGGGCDGGGGDGDGG-GGGDGDGGG 114
>SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 528
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R F+N +LP +L VLT L +H + T
Sbjct: 25 HWKRTFENFVQVLPQTGLDKLTVLTNFVSPTLFKHIEDCT 64
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 166 GSCATGSC*WKLYNVGEDGCGRKGLEDGG-DGDTDPN*SDGLEDGKG 29
G C GSC G G G DG DGD D N +G +DG G
Sbjct: 556 GFCIAGSCSDLCEGDGFGDSGGDGDGDGNHDGDGDGNYDEGDDDGFG 602
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSP-TERPFQQTHNPSERPPADHQGNYHEQSKQQHQQ 296
Q+ PV ++PK + ++ P E P +Q P + P + + E +++ +Q
Sbjct: 57 QEEPVKEEPKQEEPVEEEPKQEEPVEQ--KPKQEEPVEEEPKQEEPVEEEQKQ 107
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSP-TERPFQQTHNPSERPPADHQGNYHEQSKQQHQQ 296
Q+ PV ++PK + ++ P E P ++ P + P + + E K++ +Q
Sbjct: 67 QEEPVEEEPKQEEPVEQKPKQEEPVEE--EPKQEEPVEEEQKQEEPVKEEPKQ 117
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +3
Query: 213 QQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPNGGELVPSISEYEQHITLNGPTASP 392
QQ + + PPA Q YH + Q+Q N V G P + + SP
Sbjct: 529 QQAYQAARSPPAPGQPQYHPAQQIQYQNPGNYRVHRGPPQRPPPLPSQPQLAEKPALQSP 588
Query: 393 SF 398
S+
Sbjct: 589 SY 590
>SB_34857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 195 PTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVP 317
PT P Q N ER P D + YHE S+ QH + + +P
Sbjct: 4 PTISPSAQ--NVYEREPLDFR-EYHESSRLQHDISTTETIP 41
>SB_34601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1391
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 115 DGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
DG G G DGG+GD D + +G DG G
Sbjct: 1136 DGDGGNGDGDGGNGDGDGDGGNGDGDGDG 1164
>SB_28807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 136 KLYNVGEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
K ++ +D G G +D GD D D + DG DG G
Sbjct: 63 KNFDFVDDNGGGDGDDDDGDDDNDDDDGDGDGDGDG 98
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +3
Query: 159 QDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPNGGELVP 338
Q K Q H + ++ ++ NP + Q YH + +Q+HQQ Q V
Sbjct: 867 QQGKQQHHRLHQ--QQRHKKNDNPHQHQQQKQQHGYHHRHQQKHQQKQQQHQRKTSNRVS 924
Query: 339 SISEYEQHIT 368
+ +E+ T
Sbjct: 925 THQRHEEKDT 934
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 127 NVGEDGCGRKGL-EDGGDGDTDPN*SDGLEDGKG 29
N G+ GC G +D GDG D + DG +DG G
Sbjct: 581 NGGDGGCDGDGFGDDNGDGFGDGD-GDGCDDGDG 613
>SB_57148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 136 KLYNVGEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
K ++ +D G G +D GD D D + DG DG G
Sbjct: 270 KNFDFVDDNGGGDGDDDDGDDDNDDDDGDGDGDGDG 305
>SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1)
Length = 249
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 115 DGCGRKGLEDG-GDGDTDPN*SDGLEDGKG 29
DGC G DG GDGD D + DG + G G
Sbjct: 56 DGCDGDGDGDGDGDGDGDGDGGDGGDGGDG 85
>SB_6724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 258 LDGLLVVFPRDYVFVEKAS 202
+DGLLV FP DY++ E+ S
Sbjct: 260 IDGLLVYFPYDYIYPEQYS 278
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 141 QQLPVAQDPKS--QFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFV 314
QQ P+ Q ++ + H +N PT ++ + + A++ + Q QT
Sbjct: 434 QQPPLGQHLRTHPERHSKNEPTTIKREELYTFVQAAEAENNRSSSSQPPPSQNQTTASTT 493
Query: 315 PNGGELVPSISEYEQHITLNGPTASPSFDN 404
P+ S+ EQ T PT SPS +N
Sbjct: 494 TTTTLGNPTPSQ-EQSATTGNPTPSPSHNN 522
>SB_45661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDG-DTDPN*SDGLE-DGKG 29
GE+ G + E+G DG ++D SDG E DGKG
Sbjct: 106 GEESDGEESDEEGSDGEESDGEESDGEESDGKG 138
>SB_32409| Best HMM Match : Oxidored_q2 (HMM E-Value=0.081)
Length = 185
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 121 GEDGCGRKGL-EDGGDGDTDPN*SDGLEDGKG 29
G DG G G +DGGDGD D D +DG G
Sbjct: 137 GSDGGGGDGEDDDGGDGDDDDG-GDVEDDGDG 167
>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 328 NWCRLFQNMNNILPSMVQQRLLVLTTLAHSNLLQHQANLT 447
+W R +N +LP +L VLT L QH + T
Sbjct: 25 HWKRTLENFVQVLPQTGLDKLTVLTNFVSPTLFQHIEDCT 64
>SB_1938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 129 YNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQ 296
+N QQ + + Q + N +R Q HN ++ +Q +Q KQQH+Q
Sbjct: 242 HNKRQQQRQQHNRRQQQQLHNQQQQR---QQHNRRQQQQQHNQQQQQQQLKQQHKQ 294
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 124 VGEDGCGRKGLEDGGDGDTDPN*SDGLED 38
V + G G +D GDGD D N DG +D
Sbjct: 327 VNDGGGGGGDNDDDGDGDDDDNDDDGDDD 355
>SB_29859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDGDTDPN*SDGLEDG 35
G+DG G +DGGD D D N DG +DG
Sbjct: 12 GDDGGGDGDGDDGGDDDDDDN-DDG-DDG 38
>SB_19167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 123 TLYNFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTV 302
T + ++QQL + K+ + S ERP++ + +PP + +HE ++Q
Sbjct: 96 THHEYNQQLTHVRTNKNHSPAE-SHEERPWKNHDSLEHQPPPAEENTHHEYNQQPTHVRT 154
Query: 303 NQ 308
N+
Sbjct: 155 NK 156
>SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1239
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDGDTDPN*SDGLEDGKG 29
G+DG G G DG D D D + DG DG G
Sbjct: 13 GDDGSGGDGDGDGDDNDNDNDDVDG--DGGG 41
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQF 311
Q +P Q P +Q Q P + FQQ ++ HQ Q+ Q QQT ++
Sbjct: 1177 QNMPQQQQPATQLPSQGQPAPQYFQQQFQMFQQ-HMQHQQVRGGQAPGQQQQTAIEY 1232
>SB_14906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +1
Query: 211 FNKHIIPRKDHQQTIKATTMNSQNNSINKL*TSLYQTVENWCRLFQNMNNILPSMVQQRL 390
F I+P ++ T + N NKL T+ Y + NW + + +MVQ +
Sbjct: 7 FKVVIVPERERNWLQHGTVQETGYNKCNKLVTTWY-SARNWLQ-HGTVQETGYNMVQCKK 64
Query: 391 LVLTTLAHSNLLQ 429
LV T + N LQ
Sbjct: 65 LVTTWYSARNWLQ 77
>SB_2496| Best HMM Match : GRP (HMM E-Value=9)
Length = 142
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 121 GEDGCGRKGLEDGGDGDTDPN*SDGLEDG 35
G+ G G G DG DGD D + DG DG
Sbjct: 103 GDGGDGDDGDGDGDDGDGDGDDGDGDGDG 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,529,806
Number of Sequences: 59808
Number of extensions: 319786
Number of successful extensions: 1635
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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