Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1802
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 36 0.039
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 33 0.16
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical... 31 0.84
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 30 1.5
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.6
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 29 3.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 4.5
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 29 4.5
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 29 4.5
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 29 4.5
Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical pr... 28 5.9
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 28 7.9
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 28 7.9
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 7.9
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +3
Query: 141 QQLPVAQ-DPKSQFHIQNSPTERPFQQTHNP------SERPPADHQGNYHEQSKQQHQQT 299
Q++P Q P Q H Q E FQQ H P +++PP +Q N Q +QQ Q
Sbjct: 957 QKMPNQQGQPMQQVH-QGGHQEEGFQQQHGPPNNQGQNQQPPMQNQQNIPIQHQQQQQNM 1015
Query: 300 VNQ 308
+NQ
Sbjct: 1016 MNQ 1018
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/74 (22%), Positives = 28/74 (37%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPN 320
+Q+ Q +QNSP + P ++ HQ Q Q + + Q
Sbjct: 781 RQMTPQQSQSIHGSMQNSPQNPQMRMNLAPPQQQQQHHQNQPPMQGNPQSDRQMPQMQQP 840
Query: 321 GGELVPSISEYEQH 362
G ++ P+I QH
Sbjct: 841 GRQIHPNIKRQPQH 854
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 132 NFHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPP-ADHQGNYHEQSKQQHQQTV 302
N++QQ AQ P+ Q Q ++P QQ RPP G QS + H Q V
Sbjct: 94 NYNQQPQGAQQPQQQVQQQVQQPQQPVQQPQPTPIRPPQPQRSGQQPVQSFESHTQIV 151
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical protein
B0379.3b protein.
Length = 1050
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Frame = +3
Query: 129 YNFHQQLP--VAQDPK-SQFHIQNS--PTERPFQQTHNPSERPPADHQGN---YHEQSKQ 284
YN Q P ++ P +Q QNS P + P N P +H G+ YHE
Sbjct: 814 YNHVGQQPSHMSNQPHINQNGYQNSYNPNQGPTSSDPNYGCNPQFNHYGSRSVYHEDHSS 873
Query: 285 QHQQTVNQFVPNGGELVP----SISEYEQHITLNGPTASP-SFDN 404
Q +++ +QF PN E P +++YE+ G + +P FD+
Sbjct: 874 QRRRSPDQFPPNPPEYDPHGNFKLADYERDRMTVGYSQNPHQFDH 918
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +3
Query: 135 FHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFV 314
+ QLPV Q Q+ Q ++P Q + + PP + Q ++Q Q+ +
Sbjct: 736 YQPQLPVQQPQPHQYAPQPIHHQQPIHQPMHGQQYPPVNQQQPIYQQPAPQYPP--YNSI 793
Query: 315 PNGGELVPSISEYEQ 359
N + PS Y Q
Sbjct: 794 QNNPQHGPSPFNYSQ 808
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical protein
B0379.3a protein.
Length = 1054
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Frame = +3
Query: 129 YNFHQQLP--VAQDPK-SQFHIQNS--PTERPFQQTHNPSERPPADHQGN---YHEQSKQ 284
YN Q P ++ P +Q QNS P + P N P +H G+ YHE
Sbjct: 818 YNHVGQQPSHMSNQPHINQNGYQNSYNPNQGPTSSDPNYGCNPQFNHYGSRSVYHEDHSS 877
Query: 285 QHQQTVNQFVPNGGELVP----SISEYEQHITLNGPTASP-SFDN 404
Q +++ +QF PN E P +++YE+ G + +P FD+
Sbjct: 878 QRRRSPDQFPPNPPEYDPHGNFKLADYERDRMTVGYSQNPHQFDH 922
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +3
Query: 135 FHQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFV 314
+ QLPV Q Q+ Q ++P Q + + PP + Q ++Q Q+ +
Sbjct: 740 YQPQLPVQQPQPHQYAPQPIHHQQPIHQPMHGQQYPPVNQQQPIYQQPAPQYPP--YNSI 797
Query: 315 PNGGELVPSISEYEQ 359
N + PS Y Q
Sbjct: 798 QNNPQHGPSPFNYSQ 812
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 153 VAQDPKSQFHIQNSPTERPFQQTHNPS---ERPPADHQGNYHEQSKQQH 290
++ D + +Q S RPF+ T P PP HQ + + Q +QQH
Sbjct: 696 ISPDLQRDSSMQRSEYSRPFRPTSRPKTPPPPPPMQHQNHQNHQYQQQH 744
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 153 VAQDPKSQFHIQNSPTERPFQQTHNPS---ERPPADHQGNYHEQSKQQH 290
++ D + +Q S RPF+ T P PP HQ + + Q +QQH
Sbjct: 696 ISPDLQRDSSMQRSEYSRPFRPTSRPKTPPPPPPMQHQNHQNHQYQQQH 744
>AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical
protein C17H12.5 protein.
Length = 443
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 65 ISVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKK 172
I +TPV S PPAT T + P+TT + +P K
Sbjct: 101 IEAALTPVAFSPPPATQATQAMDAPATTKTAVKPTK 136
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +3
Query: 153 VAQDPKSQFH--IQNSPTERPFQQT-HNPSERPPADHQGNYHEQSKQQHQQTVNQFVPNG 323
+ Q+ S H +Q+ + FQ P E ADHQ +Q + H++ P
Sbjct: 70 IFQEDASSAHQDVQDQKDHQDFQDLLDQPEETEDADHQDQLEDQESKDHREMQEDQEP-- 127
Query: 324 GELVPSISEYEQHITLNGPTAS 389
P + + + H+ P+ S
Sbjct: 128 ----PDVQDQQDHVENQEPSTS 145
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 144 QLPVAQDPKSQFHIQNSPTERPFQQTHNPS-ERPPADHQGNYHEQSKQQHQQTVNQF 311
Q P A + + QF S R P +RP HQ + +Q + QHQQ QF
Sbjct: 70 QPPPAFNNQPQF--AQSVNTRQISNEGGPQVQRPQVQHQQQFQQQVQAQHQQQQPQF 124
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 138 HQQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQH 290
+QQ Q+P+ + QN T Q S +HQ + ++Q + QH
Sbjct: 640 YQQQAGYQNPQQHQNYQNGTTNENGQYQQQQSSEVKQEHQNHGYQQQQAQH 690
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 165 PKSQFHIQNSPTER---PFQQTHNPSERPPADHQGNYHEQSKQQH 290
P Q+H+Q P P H ++ PP G YH Q +QQH
Sbjct: 79 PHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSGYYHHQ-QQQH 122
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 TVASIRISVPITPVFQSLPPATIFTNVI*LPSTTSCSTRPKKPVPYSKFTH*EAFSTNT* 226
T + + P T + P T T P+TT+ T +K T T T
Sbjct: 250 TTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKST------TTTT 303
Query: 227 SLGKTTSRPSRQLP*TVKTTASTN-CKPVCTKRW 325
KTTS P+ T KT T+ C +C+ W
Sbjct: 304 KTTKTTSTPTTTTT-TPKTPFDTSKCTVMCSTGW 336
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +3
Query: 168 KSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPNGGELVPSIS 347
K+Q+H+ N P Q ++ + G Y + S Q QQ + P E S
Sbjct: 397 KNQYHLYNDNNTYPHQPAMYSNQTSSNGYYGGYEDVSNNQFQQP--DYPPLSVESQVSCH 454
Query: 348 EYEQHIT 368
E +IT
Sbjct: 455 SQESNIT 461
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPN 320
+Q P Q S +QN P ++P Q + P H + + VNQF N
Sbjct: 1231 RQPPPQQSYNSNQMLQN-PRQQPQNQIVQNFQSAPQRHPHQNPQIATSSSSGGVNQFYNN 1289
Query: 321 GGELVPSISE 350
GG P + +
Sbjct: 1290 GGAAPPVVEQ 1299
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVN 305
Q +P+ ++Q H +++ + + P ++PP Q +QS+QQ+QQ N
Sbjct: 3 QNIPIKILGQNQSHSRSNSSSSVDNDRNQPPQQPP---QPQPQQQSQQQYQQAPN 54
>Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical
protein C44H9.6 protein.
Length = 610
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 249 DHQGNYHEQSKQQHQQTVNQFVPNGGELVPSISEYEQHITLNGPTASP 392
++ NY E + + + Q N G L E IT+N T P
Sbjct: 480 NNNNNYDEYDRSEISDEIQQIGSNDGSLSDGCDFIETEITINNETPDP 527
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPN 320
++LP A+ PK + TE T P ER + +Q ++Q Q N+F+ N
Sbjct: 20 RKLPSARIPKKPKETDGNSTETVVNSTEKPEER--KEKPPKPPKQKQKQKQNLNNKFLKN 77
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPN 320
++LP A+ PK + TE T P ER + +Q ++Q Q N+F+ N
Sbjct: 20 RKLPSARIPKKPKETDGNSTETVVNSTEKPEER--KEKPPKPPKQKQKQKQNLNNKFLKN 77
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 141 QQLPVAQDPKSQFHIQNSPTERPFQQTHNPSERPPADHQGNYHEQSKQQHQQTVNQFVPN 320
++LP A+ PK + TE T P ER + +Q ++Q Q N+F+ N
Sbjct: 20 RKLPSARIPKKPKETDGNSTETVVNSTEKPEER--KEKPPKPPKQKQKQKQNLNNKFLKN 77
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Frame = +3
Query: 144 QLPVAQDP--KSQFHIQNSPTERPFQQTHNPSERPPADHQGNY---HEQSKQQHQQTVNQ 308
QLP Q+P + Q H ++ +QQ + Q N H +Q HQQ Q
Sbjct: 1011 QLPPLQNPHNQQQQHQMLHQSQMNYQQVQQVQQVQHVQQQQNLQNQHHHQQQHHQQNQQQ 1070
Query: 309 FVPNGGELVPSISEYEQHITLNG 377
N ++ + EQ G
Sbjct: 1071 APGNRSRSHSNVGKMEQEAQRQG 1093
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,174,155
Number of Sequences: 27780
Number of extensions: 247325
Number of successful extensions: 1036
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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