Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1801
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 624 GWHDWGENLD 653
           GW+DW E L+
Sbjct: 174 GWNDWPEELE 183


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 624 GWHDWGENLD 653
           GW+DW E L+
Sbjct: 174 GWNDWPEELE 183


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 624 GWHDWGENLD 653
           GW+DW E L+
Sbjct: 174 GWNDWPEELE 183


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -1

Query: 367 YVLPSDLPSRSGIWKARRWLKSSGLKSLTKR 275
           Y L     ++   WK   W K    KS +K+
Sbjct: 409 YYLKPSYDAQEPAWKTHVWKKGRDKKSTSKK 439


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/37 (21%), Positives = 18/37 (48%)
 Frame = +1

Query: 406 ISLWSKVWRCLPSFRSHNIAFMSLPPDAHKEPSGDTV 516
           +S+    W+ LP     ++    + P + K+ +GD +
Sbjct: 12  LSIVDAAWKPLPENLKEDLIVYQVYPRSFKDSNGDGI 48


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -3

Query: 647 ILTPIMPTPLLYPCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 510
           +L  I+  P      W +    W L  CKL+      S Y++ +T+
Sbjct: 80  LLFLILGLPFELSVFWQQYPWQWGLGICKLRAYVSETSSYVSVLTI 125


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/37 (21%), Positives = 18/37 (48%)
 Frame = +1

Query: 406 ISLWSKVWRCLPSFRSHNIAFMSLPPDAHKEPSGDTV 516
           +S+    W+ LP     ++    + P + K+ +GD +
Sbjct: 12  LSIVDAAWKPLPENLKEDLIVYQVYPRSFKDSNGDGI 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,893
Number of Sequences: 438
Number of extensions: 4826
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)