Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1799
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    43   0.006
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    40   0.045
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    40   0.045
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    40   0.045
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    40   0.045
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    38   0.18 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   0.98 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.7  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    34   3.9  
UniRef50_A3MT76 Cluster: Putative uncharacterized protein precur...    33   6.9  

>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 655 HWPSFYNVVTGKTLALP 705
           HWPSFYNVVTGKTLALP
Sbjct: 5   HWPSFYNVVTGKTLALP 21


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3

Query: 657 LAVVLQRRDWENPGVTQ 707
           LAVVLQRRDWENPGVTQ
Sbjct: 68  LAVVLQRRDWENPGVTQ 84


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3

Query: 657 LAVVLQRRDWENPGVTQ 707
           LAVVLQRRDWENPGVTQ
Sbjct: 22  LAVVLQRRDWENPGVTQ 38


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3

Query: 657 LAVVLQRRDWENPGVTQ 707
           LAVVLQRRDWENPGVTQ
Sbjct: 26  LAVVLQRRDWENPGVTQ 42


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3

Query: 657 LAVVLQRRDWENPGVTQ 707
           LAVVLQRRDWENPGVTQ
Sbjct: 8   LAVVLQRRDWENPGVTQ 24


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 595 RSTRGGARYPIRPIVSRIT 651
           R  RGGARYPIRPIVSRIT
Sbjct: 257 RRPRGGARYPIRPIVSRIT 275


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 19/32 (59%), Positives = 20/32 (62%)
 Frame = -3

Query: 591 KDFYFYFILLLRCVDELTGHLELCGY*AHRHL 496
           K F     LLLR VDELT HL L GY + RHL
Sbjct: 147 KRFCLSRFLLLRWVDELTAHLVLSGYWSPRHL 178


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 374 WYLPVRTHKRSYHQ 333
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 18/35 (51%), Positives = 18/35 (51%)
 Frame = -2

Query: 706 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLE 602
           W   GF     C        YDSL GELGTGPPLE
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLE 292


>UniRef50_A3MT76 Cluster: Putative uncharacterized protein
           precursor; n=1; Pyrobaculum calidifontis JCM 11548|Rep:
           Putative uncharacterized protein precursor - Pyrobaculum
           calidifontis (strain JCM 11548 / VA1)
          Length = 543

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 554 VWTSSQATWSYVVTEPIDIYNVNAPHTLRYK 462
           +WT+ Q  W +V  + +DIY VNA  T+ YK
Sbjct: 99  LWTNQQGRWVWV--QSVDIYGVNAVCTMAYK 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,245,994
Number of Sequences: 1657284
Number of extensions: 12472469
Number of successful extensions: 22218
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22217
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)