Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1798
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.52 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.52 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.8  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   3.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.7  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   3.7  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   8.5  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 330 VQDSMYNTLYLNNGIVFHENNMFS 401
           +    Y+T+  +NG+ F + N FS
Sbjct: 293 INSGFYSTIMYSNGVTFPQRNRFS 316


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 330 VQDSMYNTLYLNNGIVFHENNMFS 401
           +    Y+T+  +NG+ F + N FS
Sbjct: 293 INSGFYSTIMYSNGVTFPQRNRFS 316


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 155 FEEDIHVMMLSEEEQLAEIQRRKESVNYKC 244
           F++ I +  L +EE ++E   +K   NY C
Sbjct: 48  FKDFIKMQELLQEEDISEGNIKKYLTNYSC 77


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 571 SYIKVQDTMLFSLEAILYVVSALHVFT 651
           SY+ V   + FS+E  L +   L V+T
Sbjct: 125 SYVSVLTIVAFSMERYLAICHPLRVYT 151


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 251 YKCEKCYKGFMTDVTYTNHMIRH 319
           ++C +C+K F  D     HM  H
Sbjct: 10  FECPECHKRFTRDHHLKTHMRLH 32


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 233 NYKCSLYKCEKCYKGFMTDVTYTNHMIRHDPVS 331
           +Y   +YKC  C++ F +  T   H+  H   S
Sbjct: 254 HYGEKVYKCTLCHETFGSKKTMELHIKTHSDSS 286



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 233 NYKCSLYKCEKCYKGFMTDVTYTNHMIRH 319
           N +   Y+C  C K F     Y +H+  H
Sbjct: 56  NIEEKTYQCLLCQKAFDQKNLYQSHLRSH 84


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 245 SLYKCEKCYKGFMTDVTYTNHMIRHDPVSTGL 340
           +LY CE C + + T  + T H       S+G+
Sbjct: 34  TLYVCEFCNRRYRTKNSLTTHKSLQHRGSSGM 65


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 251 YKCEKCYKGFMTDVTYTNHMIRHDPV 328
           +KCEKC    +      +H+  H  V
Sbjct: 17  FKCEKCSYSCVNKSMLNSHLKSHSNV 42


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 434 QNLKYDLKQMQTEHVILMKD 375
           QNLK  LK   T+H IL K+
Sbjct: 53  QNLKCYLKCFMTKHGILDKN 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,816
Number of Sequences: 438
Number of extensions: 3660
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)