Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1797
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.39 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.52 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   8.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.39
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 261 PLGVFGVCDSVADHVFEEHFENAAGLFVYKTGDTFHSTCA 142
           P   +G C S  + +F +  +N A  +V ++G ++H +CA
Sbjct: 553 PTKPYGTCRS--EGIFSDP-KNCAAYYVCRSGLSYHLSCA 589


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 308 PWRFRAYTTSIAVTVFLLACSVYV 237
           PW  RAY T  +++VF++   V +
Sbjct: 197 PWGKRAYVTWYSISVFMVPLVVLI 220


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 135 TTDSRFRDALDVITQHLPVTFSA 67
           TT+ R    L ++TQ   + FSA
Sbjct: 62  TTNLRITQKLSIVTQLADLIFSA 84


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -3

Query: 236 TASRITFSRNTLRTPRVSSYIRPEIRFTPP 147
           T+S  +   +T R P   +   P  +  PP
Sbjct: 24  TSSATSIDLSTFRVPTYGTTSHPTSKLVPP 53


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -3

Query: 236 TASRITFSRNTLRTPRVSSYIRPEIRFTPP 147
           T+S  +   +T R P   +   P  +  PP
Sbjct: 24  TSSATSIDLSTFRVPTYGTTSHPTSKLVPP 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,364
Number of Sequences: 336
Number of extensions: 1979
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)