Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1796
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...   128   2e-31
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.3  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.2  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score =  128 bits (309), Expect = 2e-31
 Identities = 78/223 (34%), Positives = 121/223 (54%), Gaps = 8/223 (3%)
 Frame = +3

Query: 45  LVFCGLVSLASATIKLQEIFSWNVVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNK 224
           L+  GL  L S  +   E+  W  V+++ P +  +    R    IP   +P+G    +N+
Sbjct: 10  LLLAGLAVLVSGQV--DEVLKWQRVEYDVPAEVLQ----RENGYIPIGNIPMGAVHHKNR 63

Query: 225 LFVSVPRWRSGIPATLNYIPLDAPY-EPSPKLTPYPSFEGNEL-GNCQ---TGLTTVYRV 389
           +FV+V R R GIP+TLN + L  P+   +  L PYP+F  NEL  + Q     + TVYR 
Sbjct: 64  VFVAVARRRWGIPSTLNVVDLSPPFPNTNVILKPYPNFALNELRADLQPDANRIVTVYRP 123

Query: 390 KADQCDRLWVLDVGTYGY-DNVTNVCPYTLNVFDLNTDQIIRKYVLRPEDIVSTTF-IAN 563
           + D+CDRLW +D G      N T V   ++   DLNT++ I ++ + P++ V T + + +
Sbjct: 124 RVDRCDRLWFVDTGMMEIPGNFTVVQRPSVWSIDLNTNEPIHRFEI-PKEAVETGYGLTS 182

Query: 564 IALDIGTS-CEDTFAYFSDELGYGLIAYSWEQNKSWRFSHSYF 689
           I LD+  S CE  F Y SD   Y ++ Y +   ++WRF H+YF
Sbjct: 183 ITLDVDPSDCEKVFVYISDLQTYRMVVYDYANRRAWRFLHNYF 225


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
 Frame = +3

Query: 177 IPENALPVGIERWRNKLFVSVP---RWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNE 347
           IP   LP  +   R   F   P   R+ +G P   N  P  AP  P P   P     G  
Sbjct: 543 IPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGP 602

Query: 348 LG 353
           LG
Sbjct: 603 LG 604


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -3

Query: 666  MTCSVPTSKR*DHSPVHRRSRQRCPHSWYRYRER 565
            ++C    S R  H+ +HR     CP    ++  R
Sbjct: 902  VSCHKTVSNRWHHANIHRPQSHECPVCGQKFTRR 935


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 679  WLNLHDLFC 653
            WL LHDL+C
Sbjct: 1545 WLRLHDLYC 1553


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 294 PYEPSPKLTPYPSFEGNELGNCQTGLTTV 380
           PY+  P  T +  F G   G C  GL  +
Sbjct: 39  PYKSIPGPTLWQLFRGFSKGGCYDGLNLI 67


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 624 PVHRRSRQRCPHSWYRYR 571
           P  RRSR   P SW R R
Sbjct: 275 PARRRSRSTRPTSWPRSR 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,425
Number of Sequences: 2352
Number of extensions: 16569
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)