Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1795
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 33 0.041
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 32 0.095
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 30 0.29
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 0.67
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 29 0.88
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.88
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 28 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.0
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.7
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 27 3.6
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 4.7
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 6.2
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 26 6.2
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 8.2
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 33.1 bits (72), Expect = 0.041
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSAI 411
P AAP V EA S +H P VAP AP AAP A + PA+
Sbjct: 515 PQPPAAPVVPEAPS---VHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEA 571
Query: 412 HQVP 423
VP
Sbjct: 572 LSVP 575
Score = 32.7 bits (71), Expect = 0.054
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 250 PAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSAIHQVP 423
P+V + + + AP+ H PA AP +AP +A AP++ A+ VP
Sbjct: 512 PSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVP 569
Score = 30.3 bits (65), Expect = 0.29
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1
Query: 220 IQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHA 399
I A A P+V S Q +AP AP+ H+ P AP SA AP +
Sbjct: 497 ISSASQKAAQPSVITPSVPQP-PAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPE 555
Query: 400 TSAIHQVPA 426
++ Q PA
Sbjct: 556 APSVPQRPA 564
Score = 29.9 bits (64), Expect = 0.38
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +1
Query: 220 IQEAPTYH---AAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 390
+ EAP+ H AAP E S +AP AP+ + P P A S AP
Sbjct: 523 VPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPV 582
Query: 391 IHATSAIHQVP 423
++ Q P
Sbjct: 583 APEVPSVPQPP 593
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/68 (23%), Positives = 22/68 (32%)
Frame = +1
Query: 220 IQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHA 399
+ EAP+ P A ++ P V P P AAP + PA+
Sbjct: 598 VPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPV 657
Query: 400 TSAIHQVP 423
VP
Sbjct: 658 VPEAPSVP 665
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +1
Query: 226 EAPTYH---AAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIH 396
E P+ A P V EA S +AP P+ + P P A S AP +
Sbjct: 615 EVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
Query: 397 ATSAIHQVPA 426
++ Q PA
Sbjct: 675 EVPSVPQPPA 684
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/68 (25%), Positives = 23/68 (33%)
Frame = +1
Query: 220 IQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHA 399
+ EAP+ PAV ++ P VAP P AP A + P
Sbjct: 553 VPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPV 612
Query: 400 TSAIHQVP 423
+ VP
Sbjct: 613 APEVPSVP 620
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/61 (22%), Positives = 21/61 (34%)
Frame = +1
Query: 211 IHTIQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 390
+ + EAP+ PA ++ P V P P AAP + PA
Sbjct: 625 VPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPA 684
Query: 391 I 393
+
Sbjct: 685 V 685
Score = 25.4 bits (53), Expect = 8.2
Identities = 19/68 (27%), Positives = 23/68 (33%)
Frame = +1
Query: 220 IQEAPTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHA 399
+ P AP V EA S + P VAP P A P A + PA
Sbjct: 586 VPSVPQPPVAPVVPEAPS---VPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPV 642
Query: 400 TSAIHQVP 423
+ VP
Sbjct: 643 VPEVPSVP 650
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.9 bits (69), Expect = 0.095
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 488 PPQLDMKIIMLTNMPTLNTDTLTRLKTLTPATTSLNTRPVMVTSSRVNTPSCNLMVHSAR 667
PP + T PT + ++ T T+ P TT +NT V+ ++ VNT + A
Sbjct: 97 PPTTSLNTTTTTAPPTTHVNSTT---TVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHAN 153
Query: 668 SPTLLTTTMVST 703
+ + + TT S+
Sbjct: 154 TTSFVPTTTESS 165
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 30.3 bits (65), Expect = 0.29
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 431 IQHQLFMKLQLFTFPPHFTP--PQLDMKIIML 520
+QH LF KL+L PPH P P LD+ L
Sbjct: 342 LQHSLFFKLKLKFLPPHKLPWIPSLDVSSFSL 373
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.1 bits (62), Expect = 0.67
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +2
Query: 413 TRSPPTIQHQLFMKLQLFTFPPHFTPPQLDMKIIMLTNM-----PTLNTDTLTRLKTLTP 577
T + P ++ + ++ T P + I T M PT+ T TL TP
Sbjct: 213 TTTTPMVETMITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTTLPTAAMTTP 272
Query: 578 ATTSLNTRPV--MVTSSRVNTPSCNLMVHSARSPTLLTTT 691
+ T V M+T + V T + MV + +PT++TTT
Sbjct: 273 VEETTTTPMVETMITPTVVTTTTP--MVETMITPTVVTTT 310
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 521 TNMPTLNTDTLTRLKTL-TPATTSLNTRPVMVTSSRVNTPSCNLMVHSARSPTLLTTTMV 697
T P T T ++T+ TP ++ T +V S V+T + + +PT+ TTT+
Sbjct: 206 TTTPMEETTTTPMVETMITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTTLP 265
Query: 698 STQSST 715
+ +T
Sbjct: 266 TAAMTT 271
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 28.7 bits (61), Expect = 0.88
Identities = 17/89 (19%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 428 TIQHQLFMKLQLFTFPPHFTPPQLDMKIIMLTNM--PT--LNTDTLTRLKTLTPATTSLN 595
T H+ +++ + PH PP+ D+ + +N P+ +++ +T++ + +L+
Sbjct: 77 TTDHKKYVESSYAAYDPHDQPPERDVSLKESSNKINPSNFFDSEQITKINAVKKRFPALD 136
Query: 596 TRPVMVTSSRVNTPSCNLMVHSARSPTLL 682
+ ++ T + N N+ +H LL
Sbjct: 137 SEMIIATLEKFNWRE-NITIHKLTFQKLL 164
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.7 bits (61), Expect = 0.88
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 521 TNMPTLNTDTLTRLKTLTPATTSLNTRPVMVTSSRVNTP--SCNLMVHSARSPTLLTTTM 694
T + + N+ T T + + P S NT V+ TSS +TP S N ++ S T LT+
Sbjct: 503 TPLTSANSTTSTSVSSTAP---SYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVN 559
Query: 695 VSTQSS 712
+T +S
Sbjct: 560 STTATS 565
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 521 TNMPTLNTDTLTRLKTLTPATTSLNTRPVMVTSSRVNTP--SCNLMVHSARSPTLLTTTM 694
T + + N+ T T + + P S NT V+ TSS +TP S N ++ S T L++
Sbjct: 389 TPLTSANSTTSTSVSSTAP---SYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVN 445
Query: 695 VSTQSS 712
+T +S
Sbjct: 446 STTATS 451
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 533 TLNTDTLTRLKTLTPATTS----LNTRPVMVTSSRVNTPSCNLMVHSARSPT 676
+L +TR L PA+ S L+++PV V S+ +N P+ +L + S S T
Sbjct: 248 SLPISDVTRALPLAPASNSQHPSLSSQPVSVPSNTINIPTDSLSIVSNPSQT 299
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +1
Query: 232 PTYHAAPAVHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSAI 411
PT AP+ H Q + AP + VAP +AP A S+ AP A+
Sbjct: 1433 PTNPGAPSNHAP---QVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAV 1489
Query: 412 HQVP 423
VP
Sbjct: 1490 PNVP 1493
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 521 TNMPTLNTDTLTRLK-TLTPATTSLNT--RPVMVTSSRVNTPSCNLMVHSARSPTLLTTT 691
T + T N T T + T TP T+S T VTS+ V T +C + T +T+
Sbjct: 548 TPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPITSP 607
Query: 692 MVSTQSST 715
++ SST
Sbjct: 608 NSTSSSST 615
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 464 FTFPPHFTPPQLDMKIIMLTNMPTLNTDTLTRLKTLTPATTSLNT--RPVMVTSSRVNTP 637
+T P + P T++P +T + T T TTS + VTS+ + T
Sbjct: 435 YTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTT 494
Query: 638 SCNLMVHSARSPTLLTTTMVSTQSST 715
+C + T +T++ + SST
Sbjct: 495 NCTTSTSVPYTSTPVTSSNYTISSST 520
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 473 PPHFTPPQLDMKIIMLTNMPT-LNTDTLTRLKTLTPATTSLNTRPVMVTSSRVNTPSCNL 649
P H TPP + L+ +PT L + + L T T +T S V V L
Sbjct: 161 PEHLTPPSSFITAKQLSRLPTPLPPPSSSSLPTGTISTNSFCPYERKVQPEHVTKELHQL 220
Query: 650 MVHSARSP 673
+ H+ SP
Sbjct: 221 LQHNTPSP 228
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 593 NTRPVMVTSSRV--NTPSCNLMVHSARSPTLLTTTMVSTQSSTI 718
NTRPV ++ + NT S + HS +S + T T V+++ I
Sbjct: 139 NTRPVSEVNASLDLNTASRSSSAHSVKSTSSATVTNVTSKKEAI 182
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 520 QHNDLHVQLRRREVRWKREQLELHEQL 440
Q +L L+R+E+ ++REQ+EL +L
Sbjct: 63 QLENLKNDLKRKELEFEREQIELQRKL 89
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 6.2
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 KPSTTRR-PFTTLPCILLPWHRLPLKSMLLQLSTPSKKLLPTMQPQQSTRLLPTKQSTLP 295
+PST R+ P +T+P + P +L + + STPSK +LP M P+ + + + ST P
Sbjct: 446 RPSTPRKVPPSTVPK-MNP--KLQGGNSVTAPSTPSK-VLPAMSPKVAPKFQGGRSSTAP 501
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +2
Query: 188 LKSMLLQLSTPSKKLLPTMQPQQSTRLL 271
+KS + + TP++ L P ++PQ +++
Sbjct: 213 IKSTMFEKDTPNRVLAPLLEPQNLAKII 240
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 650 SGCRREYSPLTTSPSRVSC*DLWS 579
SG Y + SP+++ C D+W+
Sbjct: 525 SGSSSTYPAIDLSPAKIGCLDIWN 548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.127 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,884,050
Number of Sequences: 5004
Number of extensions: 59299
Number of successful extensions: 230
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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